RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 BPIFB1Q8TDL5 484 aa13.9□□□□□ -0.18
MDC1-209ENST00000613547 CPA5Q8WXQ8 436 aa13.9□□□□□ -0.18
MDC1-209ENST00000613547 C18orf8Q96DM3 657 aa13.9□□□□□ -0.18
MDC1-209ENST00000613547 SLC22A12Q96S37 553 aa13.9□□□□□ -0.18
MDC1-209ENST00000613547 HAUS4Q9H6D7 363 aa13.9□□□□□ -0.18
MDC1-209ENST00000613547 OSER1Q9NX31 292 aa13.9□□□□□ -0.18
MDC1-209ENST00000613547 CPQQ9Y646 472 aa13.9□□□□□ -0.18
MDC1-209ENST00000613547 BDP1A6H8Y1 2624 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 ZNF263O14978 683 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 DCXO43602 365 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 ERBB2P04626 1255 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 GLI1P08151 1106 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 SRFP11831 508 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 ALADP13716 330 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 TCF3P15923 654 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 YWHAZP63104 245 aaKnown RBP13.89□□□□□ -0.19
MDC1-209ENST00000613547 PFKPQ01813 784 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 CENPCQ03188 943 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 GRM2Q14416 872 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 CLEC16AQ2KHT3 1053 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 ARHGAP29Q52LW3 1261 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 E4F1Q66K89 784 aaPredicted RBP13.89□□□□□ -0.19
MDC1-209ENST00000613547 OR6B2Q6IFH4 312 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 VITQ6UXI7 678 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 SH3RF2Q8TEC5 729 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 NDRG1Q92597 394 aaKnown RBP13.89□□□□□ -0.19
MDC1-209ENST00000613547 EDEM1Q92611 657 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 DNAJC7Q99615 494 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 RNF38Q9H0F5 515 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 BRD9Q9H8M2 597 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 ASNSD1Q9NWL6 643 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 SMPD4Q9NXE4 827 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 MUTYHQ9UIF7 546 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 RASAL2Q9UJF2 1139 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 CCL26Q9Y258 94 aa13.89□□□□□ -0.19
MDC1-209ENST00000613547 PATJQ8NI35 1801 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 AKR1B15C9JRZ8 316 aaPredicted RBP13.88□□□□□ -0.19
MDC1-209ENST00000613547 TNFRSF10AO00220 468 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 LEFTY2O00292 366 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 HSF2BPO75031 334 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 MFAP3LO75121 409 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 TBX18O95935 607 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 CALB1P05937 261 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 NCAM1P13591 858 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 MMP8P22894 467 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 HNRNPH3P31942 346 aaKnown RBP13.88□□□□□ -0.19
MDC1-209ENST00000613547 SCNN1AP37088 669 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 GABRB2P47870 512 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 PGFP49763 221 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 COG7P83436 770 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 FCHO2Q0JRZ9 810 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 EFEMP1Q12805 493 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 USP4Q13107 963 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 MTF1Q14872 753 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 OLFML1Q6UWY5 402 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 MMS22LQ6ZRQ5 1243 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 FAM183BPQ6ZVS7 135 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 BEND5Q7L4P6 421 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 BHLHA9Q7RTU4 235 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 MIB1Q86YT6 1006 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 DRC7Q8IY82 874 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 KIAA1958Q8N8K9 716 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 CLEC4CQ8WTT0 213 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 IRF7Q92985 503 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 PCDHB18PQ96TA0 734 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.88□□□□□ -0.19
MDC1-209ENST00000613547 RPP25Q9BUL9 199 aaKnown RBP13.88□□□□□ -0.19
MDC1-209ENST00000613547 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
MDC1-209ENST00000613547 POPDC2Q9HBU9 364 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 MARCH2Q9P0N8 246 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 CFAP97Q9P2B7 532 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 WDR35Q9P2L0 1181 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 LSM7Q9UK45 103 aaKnown RBP13.88□□□□□ -0.19
MDC1-209ENST00000613547 NUDT5Q9UKK9 219 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 DUSP12Q9UNI6 340 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 SH3BP1Q9Y3L3 701 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 NOTCH4Q99466 2003 aa13.88□□□□□ -0.19
MDC1-209ENST00000613547 UNC80Q8N2C7 3258 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 GOLGA6L6A8MZA4 724 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 SLC9A3R1O14745 358 aaPredicted RBP13.87□□□□□ -0.19
MDC1-209ENST00000613547 CHADO15335 359 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 IRF1P10914 325 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 SKILP12757 684 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 UNGP13051 313 aaPredicted RBP13.87□□□□□ -0.19
MDC1-209ENST00000613547 GDI1P31150 447 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 IFNAR2P48551 515 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 KPNA1P52294 538 aaPredicted RBP13.87□□□□□ -0.19
MDC1-209ENST00000613547 SLC6A3Q01959 620 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 ZNF77Q15935 545 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 FAM102AQ5T9C2 384 aaPredicted RBP13.87□□□□□ -0.19
MDC1-209ENST00000613547 ACAD10Q6JQN1 1059 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 HFE2Q6ZVN8 426 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 SLC26A9Q7LBE3 791 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 ZNF571Q7Z3V5 609 aaPredicted RBP13.87□□□□□ -0.19
MDC1-209ENST00000613547 XYLT1Q86Y38 959 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 PHF13Q86YI8 300 aaPredicted RBP13.87□□□□□ -0.19
MDC1-209ENST00000613547 SLC30A5Q8TAD4 765 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 DNASE1L2Q92874 299 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 RSPRY1Q96DX4 576 aa13.87□□□□□ -0.19
MDC1-209ENST00000613547 C11orf70Q9BRQ4 267 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms