RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ACOT1Q86TX2 421 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 MRRFQ96E11 262 aaKnown RBP17.17■□□□□ 0.34
CNOT3-208ENST00000613073 PIWIL1Q96J94 861 aaKnown RBP17.17■□□□□ 0.34
CNOT3-208ENST00000613073 LPIN3Q9BQK8 851 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 FAM49BQ9NUQ9 324 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 STOML1Q9UBI4 398 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 PHTF1Q9UMS5 762 aa17.17■□□□□ 0.34
CNOT3-208ENST00000613073 PIN4Q9Y237 131 aaKnown RBP17.17■□□□□ 0.34
CNOT3-208ENST00000613073 CAPN9O14815 690 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 LIASO43766 372 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 WDR4P57081 412 aaKnown RBP17.16■□□□□ 0.34
CNOT3-208ENST00000613073 TMED2Q15363 201 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 TAF5Q15542 800 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 TFDP3Q5H9I0 405 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 LRRC38Q5VT99 294 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 NOTUMQ6P988 496 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 SESTD1Q86VW0 696 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 NIPA2Q8N8Q9 360 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 SERPINB12Q96P63 405 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 NDNQ99608 321 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 NT5C1AQ9BXI3 368 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 ROPN1BQ9BZX4 212 aaPredicted RBP17.16■□□□□ 0.34
CNOT3-208ENST00000613073 C10orf88Q9H8K7 445 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 ROPN1Q9HAT0 212 aaPredicted RBP17.16■□□□□ 0.34
CNOT3-208ENST00000613073 NEU2Q9Y3R4 380 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 hCG_1818297A0A087WSY0 165 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 HCRTO43612 131 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 RECQL4O94761 1208 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 CD48P09326 243 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 DARSP14868 501 aaKnown RBP17.16■□□□□ 0.34
CNOT3-208ENST00000613073 CDKN2BP42772 138 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
CNOT3-208ENST00000613073 SH3PXD2AQ5TCZ1 1133 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 SYDE1Q6ZW31 735 aaPredicted RBP17.16■□□□□ 0.34
CNOT3-208ENST00000613073 SNX27Q96L92 541 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 DCLRE1BQ9H816 532 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 GJD2Q9UKL4 321 aa17.16■□□□□ 0.34
CNOT3-208ENST00000613073 hCG_2014768A0A024R1R8 64 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 E5RJQ4 531 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 HMGCRP04035 888 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 SKIP12755 728 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 SLC25A11Q02978 314 aaKnown RBP17.15■□□□□ 0.34
CNOT3-208ENST00000613073 INCA1Q0VD86 236 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 P3H1Q32P28 736 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 RAB6CQ53S08 254 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 PPP1R26Q5T8A7 1209 aaPredicted RBP17.15■□□□□ 0.34
CNOT3-208ENST00000613073 RHBDF2Q6PJF5 856 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 RAB6CQ9H0N0 254 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 NAALADL1Q9UQQ1 740 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 USH1CQ9Y6N9 552 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 SMIM35A0A1B0GVV1 85 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 ATP5DP30049 168 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 PSEN2P49810 448 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 CCDC15Q0P6D6 951 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 IZUMO3Q5VZ72 239 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 OR6B2Q6IFH4 312 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 CCDC89Q8N998 374 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 HSPH1Q92598 858 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 MIPEPQ99797 713 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 TRAIPQ9BWF2 469 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 NME7Q9Y5B8 376 aa17.15■□□□□ 0.34
CNOT3-208ENST00000613073 RASA4BC9J798 803 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 RASA4O43374 803 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 CREB3O43889 395 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 KPNB1Q14974 876 aaKnown RBP17.14■□□□□ 0.33
CNOT3-208ENST00000613073 CDO1Q16878 200 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 GOLGA7BQ2TAP0 167 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 WASHC2DQ5SRD0 308 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 RASAL3Q86YV0 1011 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 C9orf72Q96LT7 481 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 TMEM121Q9BTD3 319 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 DDX56Q9NY93 547 aaKnown RBP17.14■□□□□ 0.33
CNOT3-208ENST00000613073 MBLAC1A4D2B0 266 aaPredicted RBP17.14■□□□□ 0.33
CNOT3-208ENST00000613073 IL9RQ01113 521 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 NT5DC4Q86YG4 428 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 DCTN4Q9UJW0 460 aa17.14■□□□□ 0.33
CNOT3-208ENST00000613073 C3orf70A6NLC5 250 aaPredicted RBP17.13■□□□□ 0.33
CNOT3-208ENST00000613073 ATP5HO75947 161 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 IFNB1P01574 187 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 KLRC2P26717 231 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 MIPP30301 263 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 SNX17Q15036 470 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 HADHQ16836 314 aaKnown RBP17.13■□□□□ 0.33
CNOT3-208ENST00000613073 ACSBG2Q5FVE4 666 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 C4orf50Q6ZRC1 276 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 FAM183BPQ6ZVS7 135 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 TRMT10CQ7L0Y3 403 aaKnown RBP17.13■□□□□ 0.33
CNOT3-208ENST00000613073 C7orf31Q8N865 590 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 OR6B3Q8NGW1 331 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 MCRS1Q96EZ8 462 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 TRAPPC9Q96Q05 1148 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 GOLGA2P5Q9HBQ8 144 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 TBX10O75333 385 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 PFKMP08237 780 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 PDGFRBP09619 1106 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 SPATA31D3P0C874 917 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 ARSEP51690 589 aa17.13■□□□□ 0.33
CNOT3-208ENST00000613073 NEK3P51956 506 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms