RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 LLGL1Q15334 1064 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 C15orf59Q2T9L4 293 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 BOLA3Q53S33 107 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 TFDP3Q5H9I0 405 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 RAB41Q5JT25 222 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 TXNRD3NBQ6F5E7 133 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 CCDC137Q6PK04 289 aaKnown RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 MFSD7Q6UXD7 560 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 SPOCD1Q6ZMY3 1216 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 DCP1BQ8IZD4 617 aaKnown RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 EIF1ADQ8N9N8 165 aaKnown RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 ZSCAN1Q8NBB4 408 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 ZMIZ2Q8NF64 920 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 CMASQ8NFW8 434 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 CENPIQ92674 756 aaPredicted RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 KCNK16Q96T55 309 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 HINFPQ9BQA5 517 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 DDX23Q9BUQ8 820 aaKnown RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 HEMGNQ9BXL5 484 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 CNGB3Q9NQW8 809 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 TMLHEQ9NVH6 421 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 KLHL11Q9NVR0 708 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 ZNF446Q9NWS9 450 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 EFR3BQ9Y2G0 817 aa9.32□□□□□ -0.92
CCDC47-207ENST00000612558 UTP11Q9Y3A2 253 aaKnown RBP9.32□□□□□ -0.92
CCDC47-207ENST00000612558 FNDC1Q4ZHG4 1894 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 ABHD14A-ACY1A0A1B0GW23 586 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 C3orf70A6NLC5 250 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 HHLA1C9JL84 531 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 KIAA0355O15063 1070 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 TTI1O43156 1089 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 SIAH2O43255 324 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 SEC31AO94979 1220 aaKnown RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 GALTP07902 379 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 BDNFP23560 247 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 KDELR1P24390 212 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 CDKN2BP42772 138 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 PTGIRP43119 386 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 NDUFV1P49821 464 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 CACNA2D1P54289 1103 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 MRPL58Q14197 206 aaKnown RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 CCNG2Q16589 344 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 CDO1Q16878 200 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 SMTNL2Q2TAL5 461 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 KCNT1Q5JUK3 1230 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 SH3PXD2AQ5TCZ1 1133 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 FAM171A1Q5VUB5 890 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.31□□□□□ -0.922e-10■■■■□ 20.1
CCDC47-207ENST00000612558 ANKS1BQ7Z6G8 1248 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 SPATA2LQ8IUW3 424 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 CCDC105Q8IYK2 499 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 SCML4Q8N228 414 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 KCTD6Q8NC69 237 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 FAM172AQ8WUF8 416 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 HLA-CQ95604 372 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 FAM149B1Q96BN6 582 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 VWCEQ96DN2 955 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 TMEM209Q96SK2 561 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 TBCBQ99426 244 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 HERPUD2Q9BSE4 406 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 C11orf84Q9BUA3 381 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 ULBP1Q9BZM6 244 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 DCLK3Q9C098 648 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 ZCWPW1Q9H0M4 648 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 RAB17Q9H0T7 212 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 PLEKHA4Q9H4M7 779 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 PNPLA8Q9NP80 782 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 NGRNQ9NPE2 291 aaKnown RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 DMAP1Q9NPF5 467 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 TMEM30AQ9NV96 361 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 FEZ2Q9UHY8 353 aaPredicted RBP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 RASAL2Q9UJF2 1139 aa9.31□□□□□ -0.92
CCDC47-207ENST00000612558 SF3B1O75533 1304 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC47-207ENST00000612558 PTPRDP23468 1912 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 hCG_1818297A0A087WSY0 165 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 TRIM43BA6NCK2 446 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 OR6C75A6NL08 312 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 EFCAB14O75071 495 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 DAB1O75553 588 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 DGKIO75912 1065 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 UPP2O95045 317 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 ZBED1O96006 694 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 HSPA1AP0DMV8 641 aaKnown RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 HSPA1BP0DMV9 641 aaKnown RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 MYBL2P10244 700 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 KRT10P13645 584 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 FGFR3P22607 806 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 NOS2P35228 1153 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 ALDH7A1P49419 539 aaKnown RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 CDR1P51861 262 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 HDAC4P56524 1084 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 DAOAP59103 153 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 CUL1Q13616 776 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 PDK2Q15119 407 aa9.3□□□□□ -0.92
CCDC47-207ENST00000612558 NFE2Q16621 373 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-207ENST00000612558 TAZQ16635 292 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms