RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 E2F7Q96AV8 911 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 MOCOSQ96EN8 888 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 SPATA33Q96N06 139 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 CXCL16Q9H2A7 254 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 ASNSD1Q9NWL6 643 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 TSPAN16Q9UKR8 245 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 NFASCO94856 1347 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 KIAA1217Q5T5P2 1943 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 FAM160B1Q5W0V3 765 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 DCAF15Q66K64 600 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 RGS9BPQ6ZS82 235 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 UBR7Q8N806 425 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 SMC1BQ8NDV3 1235 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 FAM172AQ8WUF8 416 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 NDRG1Q92597 394 aaKnown RBP14.6□□□□□ -0.07
COL6A1-207ENST00000612273 TMEM176AQ96HP8 235 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 HOXC10Q9NYD6 342 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 GGA3Q9NZ52 723 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 AKT3Q9Y243 479 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 SOWAHBA6NEL2 793 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 PRR5-ARHGAP8B1AHC4 643 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 MED7O43513 233 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 MAFO75444 373 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-207ENST00000612273 KRT37O76014 449 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 SORBS2O94875 1100 aaKnown RBP14.6□□□□□ -0.07
COL6A1-207ENST00000612273 LUC7L3O95232 432 aaKnown RBP14.6□□□□□ -0.07
COL6A1-207ENST00000612273 ATG7O95352 703 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 STAG3L1P0CL83 205 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 OSBPP22059 807 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 PSEN1P49768 467 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 NEK3P51956 506 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 POLE2P56282 527 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 ARHGAP8P85298 464 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 TAP1Q03518 808 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 KLC1Q07866 573 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 OLIG2Q13516 323 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 PRKD1Q15139 912 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-207ENST00000612273 MPZL3Q6UWV2 235 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 ZPBP2Q6X784 338 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 SLC26A11Q86WA9 606 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 SULF1Q8IWU6 871 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 CLEC4CQ8WTT0 213 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 ZBED3Q96IU2 234 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-207ENST00000612273 ZNF518BQ9C0D4 1074 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 RSAD1Q9HA92 442 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 PDGFCQ9NRA1 345 aa14.6□□□□□ -0.07
COL6A1-207ENST00000612273 COL2A1P02458 1487 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-207ENST00000612273 A0A087WZ62 844 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 METTL18O95568 372 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 PIGRP01833 764 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 ATP6V1C1P21283 382 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 GPD1P21695 349 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 ADORA2AP29274 412 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 ETV4P43268 484 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 PLD5Q8N7P1 536 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 FBXO41Q8TF61 875 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 HPDLQ96IR7 371 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 FDXACB1Q9BRP7 624 aaPredicted RBP14.59□□□□□ -0.07
COL6A1-207ENST00000612273 ZCWPW1Q9H0M4 648 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 TEX264Q9Y6I9 313 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 PSMG1O95456 288 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 SNRPAP09012 282 aaKnown RBP14.59□□□□□ -0.07
COL6A1-207ENST00000612273 PDGFRBP09619 1106 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 EFNA5P52803 228 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 SLC25A3Q00325 362 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 C1orf146Q5VVC0 180 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 DENND5BQ6ZUT9 1274 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL6A1-207ENST00000612273 TRPM4Q8TD43 1214 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 DEPDC1BQ8WUY9 529 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 LRRC42Q9Y546 428 aa14.59□□□□□ -0.07
COL6A1-207ENST00000612273 PDE5AO76074 875 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 PGGT1BP53609 377 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 WASHC2DQ5SRD0 308 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 VWA5B1Q5TIE3 1220 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 LRRC74BQ6ZQY2 392 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 SESTD1Q86VW0 696 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 CMASQ8NFW8 434 aaPredicted RBP14.58□□□□□ -0.07
COL6A1-207ENST00000612273 PTCD3Q96EY7 689 aaKnown RBP14.58□□□□□ -0.07
COL6A1-207ENST00000612273 RNPEPQ9H4A4 650 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 TMEM134Q9H6X4 195 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 TMPRSS4Q9NRS4 437 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 MTO1Q9Y2Z2 717 aaKnown RBP14.58□□□□□ -0.07
COL6A1-207ENST00000612273 HES2Q9Y543 173 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 SNX9Q9Y5X1 595 aa14.58□□□□□ -0.07
COL6A1-207ENST00000612273 CYP3A5P20815 502 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 VHLP40337 213 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 GPD2P43304 727 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 ATXN3P54252 364 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-207ENST00000612273 MRPS5P82675 430 aaKnown RBP14.58□□□□□ -0.08
COL6A1-207ENST00000612273 NOMO1Q15155 1222 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 TARBP2Q15633 366 aaKnown RBP14.58□□□□□ -0.08
COL6A1-207ENST00000612273 PMF1Q6P1K2 205 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 UNC5AQ6ZN44 842 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 MTMR14Q8NCE2 650 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 PPFIBP2Q8ND30 876 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 PCDH19Q8TAB3 1148 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 RNF157Q96PX1 679 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 KCNG1Q9UIX4 513 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms