RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ZNF143P52747 638 aaPredicted RBP13.6□□□□□ -0.23
TCF3-220ENST00000611869 HABP4Q5JVS0 413 aaKnown RBP13.6□□□□□ -0.23
TCF3-220ENST00000611869 NAPEPLDQ6IQ20 393 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 CYB5D1Q6P9G0 228 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 MON1BQ7L1V2 547 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 TCP10LQ8TDR4 215 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 TEPSINQ96N21 525 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 FAM167BQ9BTA0 163 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 HEY2Q9UBP5 337 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 NRCAMQ92823 1304 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 MYH8P13535 1937 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 C4BP0C0L5 1744 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 B4GALT4O60513 344 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 GCKP35557 465 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 LHX1P48742 406 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 ITIH4Q14624 930 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 WSCD1Q658N2 575 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 SPATA24Q86W54 205 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 SGF29Q96ES7 293 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 SERPINI1Q99574 410 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 HAO1Q9UJM8 370 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 F9P00740 461 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 SREBF2Q12772 1141 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 ACAP1Q15027 740 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 ZC3H12AQ5D1E8 599 aaKnown RBP13.6□□□□□ -0.23
TCF3-220ENST00000611869 C10orf120Q5SQS8 335 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 TAF2Q6P1X5 1199 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 RNF180Q86T96 592 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 CHSY1Q86X52 802 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 ALLCQ8N6M5 410 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 SNRNP25Q9BV90 132 aaKnown RBP13.6□□□□□ -0.23
TCF3-220ENST00000611869 NXF3Q9H4D5 531 aaKnown RBP13.6□□□□□ -0.23
TCF3-220ENST00000611869 C2CD2Q9Y426 696 aa13.6□□□□□ -0.23
TCF3-220ENST00000611869 LOC100653049A0A140TA62 436 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 KRT34O76011 436 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 AKR1A1P14550 325 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 SPDYCQ5MJ68 293 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 PPP1R26Q5T8A7 1209 aaPredicted RBP13.59□□□□□ -0.23
TCF3-220ENST00000611869 SHCBP1LQ9BZQ2 653 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 STRCP1A6NGW2 1772 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 DCDC2CA8MYV0 355 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 B2RBV5 119 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 BGNP21810 368 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 CUL3Q13618 768 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 MAPRE1Q15691 268 aaKnown RBP13.59□□□□□ -0.23
TCF3-220ENST00000611869 CES3Q6UWW8 571 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 BBS12Q6ZW61 710 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 SENP8Q96LD8 212 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 KCNH4Q9UQ05 1017 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 MTO1Q9Y2Z2 717 aaKnown RBP13.59□□□□□ -0.23
TCF3-220ENST00000611869 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.59□□□□□ -0.23
TCF3-220ENST00000611869 PGK1P00558 417 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 PDHA1P08559 390 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 YWHAHQ04917 246 aaPredicted RBP13.59□□□□□ -0.23
TCF3-220ENST00000611869 UGP2Q16851 508 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 ANO4Q32M45 955 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 SLC39A4Q6P5W5 647 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 AGGF1Q8N302 714 aaeCLIP13.59□□□□□ -0.231e-6■■■□□ 16.6
TCF3-220ENST00000611869 HTR3CQ8WXA8 447 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 C18orf25Q96B23 403 aaPredicted RBP13.59□□□□□ -0.23
TCF3-220ENST00000611869 ELMO2Q96JJ3 720 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 B3GNT5Q9BYG0 378 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 ULBP1Q9BZM6 244 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 ABCF3Q9NUQ8 709 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 ARHGEF38Q9NXL2 777 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 TRIM33Q9UPN9 1127 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 USP12O75317 370 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 TRPA1O75762 1119 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 TRUB2O95900 331 aaKnown RBP13.59□□□□□ -0.23
TCF3-220ENST00000611869 ERBB2P04626 1255 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 MLH1P40692 756 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 FSTL1Q12841 308 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 RASIP1Q5U651 963 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 IL31Q6EBC2 164 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 TSHZ1Q6ZSZ6 1077 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.59□□□□□ -0.233e-6■■■■■ 27.5
TCF3-220ENST00000611869 PIGZQ86VD9 579 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 EXOC3L1Q86VI1 746 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 NETO2Q8NC67 525 aa13.59□□□□□ -0.23
TCF3-220ENST00000611869 CNTNAP2Q9UHC6 1331 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 BTBD19C9JJ37 291 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 CLGNO14967 610 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 LMNAP02545 664 aaKnown RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 ADRA1DP25100 572 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 FAAP100Q0VG06 881 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 ZDHHC17Q8IUH5 632 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 ZBED2Q9BTP6 218 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 RBPJLQ9UBG7 517 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 NUDT5Q9UKK9 219 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 DRG1Q9Y295 367 aaKnown RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 LAMA4Q16363 1823 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 C2CD2LO14523 706 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 FBXO21O94952 628 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 VNN1O95497 513 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 KBTBD12Q3ZCT8 623 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 OVOS1Q6IE37 1185 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 SLC26A7Q8TE54 656 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms