RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 SLC22A12Q96S37 553 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 CYP2S1Q96SQ9 504 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 SELENOOQ9BVL4 669 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
CLK4-215ENST00000611733 ASAH2Q9NR71 780 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 PARVAQ9NVD7 372 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 CTTNBP2NLQ9P2B4 639 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 WDR35Q9P2L0 1181 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 INTUQ9ULD6 942 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 PAXBP1Q9Y5B6 917 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 TMEM191CA6NGB0 347 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 PJA2O43164 708 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 BUB1O43683 1085 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 CCDC175P0C221 793 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 EPHA5P54756 1037 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 SNX16P57768 344 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 ZNF252P-AS1Q0IIN9 211 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 EFHC1Q5JVL4 640 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 TXNDC8Q6A555 127 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 PPP1R2P3Q6NXS1 205 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 ZDHHC17Q8IUH5 632 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 CMASQ8NFW8 434 aaPredicted RBP12.63□□□□□ -0.39
CLK4-215ENST00000611733 ITFG1Q8TB96 612 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 SHKBP1Q8TBC3 707 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 ADAM32Q8TC27 787 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 RXFP2Q8WXD0 754 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 IRGQQ8WZA9 623 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 TRIM11Q96F44 468 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 RNF38Q9H0F5 515 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 ATXN3LQ9H3M9 355 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 CALCOCO1Q9P1Z2 691 aa12.63□□□□□ -0.39
CLK4-215ENST00000611733 NCAM1P13591 858 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 RARGP13631 454 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 CBX2Q14781 532 aaPredicted RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 TEAD2Q15562 447 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 PABPC1LQ4VXU2 614 aaKnown RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 DCAF6Q58WW2 860 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 PRSS36Q5K4E3 855 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 DAB2IPQ5VWQ8 1189 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 BTBD8Q5XKL5 378 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 ELMSAN1Q6PJG2 1045 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 ING5Q8WYH8 240 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 CFAP57Q96MR6 1250 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 SLC2A13Q96QE2 648 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 POPDC2Q9HBU9 364 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 TLR8Q9NR97 1041 aaKnown RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLK4-215ENST00000611733 TRPM5Q9NZQ8 1165 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 ZNF638Q14966 1978 aaKnown RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 C2CD4BA6NLJ0 364 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 PDGFRAP16234 1089 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 ATXN1P54253 815 aaKnown RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 C15orf59Q2T9L4 293 aaPredicted RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 CCDC14Q49A88 953 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 DCUN1D2Q6PH85 259 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 PDZD4Q76G19 769 aaPredicted RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 ST13P5Q8NFI4 369 aaPredicted RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 ZNF564Q8TBZ8 553 aaPredicted RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 ZSWIM3Q96MP5 696 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 IRX2Q9BZI1 471 aaPredicted RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 ADAM7Q9H2U9 754 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 GOLPH3Q9H4A6 298 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 UXTQ9UBK9 157 aaPredicted RBP12.62□□□□□ -0.39
CLK4-215ENST00000611733 SFMBT1Q9UHJ3 866 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 GUCA1BQ9UMX6 200 aa12.62□□□□□ -0.39
CLK4-215ENST00000611733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.61□□□□□ -0.39
CLK4-215ENST00000611733 MACROD2A1Z1Q3 448 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 HSF2BPO75031 334 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 POU2F2P09086 479 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 HOXB8P17481 243 aaPredicted RBP12.61□□□□□ -0.39
CLK4-215ENST00000611733 CEBPBP17676 345 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 NOP2P46087 812 aaKnown RBP12.61□□□□□ -0.39
CLK4-215ENST00000611733 KIF5AQ12840 1032 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 OTUD1Q5VV17 481 aaPredicted RBP12.61□□□□□ -0.39
CLK4-215ENST00000611733 SNX30Q5VWJ9 437 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 MAB21L3Q8N8X9 362 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 KIAA1524Q8TCG1 905 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 RFFLQ8WZ73 363 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 TRIM44Q96DX7 344 aaPredicted RBP12.61□□□□□ -0.39
CLK4-215ENST00000611733 DDX23Q9BUQ8 820 aaKnown RBP12.61□□□□□ -0.39
CLK4-215ENST00000611733 SLC46A2Q9BY10 475 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 TRPC7Q9HCX4 862 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 ABCC13Q9NSE7 274 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLK4-215ENST00000611733 EHD2Q9NZN4 543 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 ANAPC7Q9UJX3 599 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 PRUNE2Q8WUY3 3088 aa12.61□□□□□ -0.39
CLK4-215ENST00000611733 CAPN9O14815 690 aa12.6□□□□□ -0.39
CLK4-215ENST00000611733 SART1O43290 800 aaKnown RBP12.6□□□□□ -0.39
CLK4-215ENST00000611733 COCHO43405 550 aa12.6□□□□□ -0.39
CLK4-215ENST00000611733 NCK2O43639 380 aa12.6□□□□□ -0.39
CLK4-215ENST00000611733 TLR5O60602 858 aa12.6□□□□□ -0.39
CLK4-215ENST00000611733 DAB1O75553 588 aa12.6□□□□□ -0.39
CLK4-215ENST00000611733 MOCS3O95396 460 aa12.6□□□□□ -0.39
CLK4-215ENST00000611733 GLI1P08151 1106 aa12.6□□□□□ -0.39
CLK4-215ENST00000611733 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms