RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 MAST2Q6P0Q8 1798 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 NEMP1O14524 444 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 PRPF4O43172 522 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■■■■□ 20.6
LIG4-204ENST00000611712 AMPD1P23109 780 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 SPRP35270 261 aaPredicted RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 FDFT1P37268 417 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 BCAT1P54687 386 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 RPL10AP62906 217 aaKnown RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 SLC6A3Q01959 620 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 DCAF4L1Q3SXM0 396 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 ZC3H12AQ5D1E8 599 aaKnown RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 GJC2Q5T442 439 aaPredicted RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 TMEM154Q6P9G4 183 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 ACAD11Q709F0 780 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 STK32AQ8WU08 396 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 LHX5Q9H2C1 402 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 RNPEPL1Q9HAU8 725 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 SAR1AQ9NR31 198 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 CPSF3Q9UKF6 684 aaKnown RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 INPP5FQ9Y2H2 1132 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 KIAA1551Q9HCM1 1747 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 COL16A1Q07092 1604 aaPredicted RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 B4GALT4O60513 344 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 ENTPD5O75356 428 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 KLHL2O95198 593 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 APOEP02649 317 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 SNAPC2Q13487 334 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 SIX1Q15475 284 aaPredicted RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 WASHC2DQ5SRD0 308 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 ZCCHC23Q6ZST2 131 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 TAS1R3Q7RTX0 852 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 USP33Q8TEY7 942 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 RNF139Q8WU17 664 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 OXNAD1Q96HP4 312 aaPredicted RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 FSD1LQ9BXM9 530 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 NACA2Q9H009 215 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 PLEKHA5Q9HAU0 1116 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 AAASQ9NRG9 546 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 ETNK2Q9NVF9 386 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 DLGAP2Q9P1A6 1054 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 SLC12A4Q9UP95 1085 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 EFR3BQ9Y2G0 817 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 DNAJC16Q9Y2G8 782 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 TELO2Q9Y4R8 837 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 ADM5C9JUS6 153 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 CHADO15335 359 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 SKAP2O75563 359 aaPredicted RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 TCEA3O75764 348 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 DDNO94850 711 aaPredicted RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 SKIV2L2P42285 1042 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 TAF6P49848 677 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 GDF10P55107 478 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 CDK16Q00536 496 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 POU5F1BQ06416 359 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 RIPK1Q13546 671 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 TAF5Q15542 800 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 DBN1Q16643 649 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 DGKDQ16760 1214 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 DRICH1Q6PGQ1 229 aaPredicted RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 MTHFD1LQ6UB35 978 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 LBX2Q6XYB7 198 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 KDELC2Q7Z4H8 507 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 ANKS1BQ7Z6G8 1248 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 XYLT1Q86Y38 959 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 KIAA0319LQ8IZA0 1049 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 COLGALT1Q8NBJ5 622 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 EPAS1Q99814 870 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 SNRNP25Q9BV90 132 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 FAM237BA0A1B0GVD1 139 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 GLRA3O75311 464 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 ASMTLO95671 621 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 ICAM3P32942 547 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 KPNA2P52292 529 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 PLPPR4Q7Z2D5 763 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 C1orf127Q8N9H9 656 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 LRGUKQ96M69 825 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 OSMRQ99650 979 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 ABCA3Q99758 1704 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 HERPUD2Q9BSE4 406 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 C20orf96Q9NUD7 363 aaPredicted RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 SETD4Q9NVD3 440 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 GTSE1Q9NYZ3 720 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 TJP2Q9UDY2 1190 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 DDX60LQ5H9U9 1706 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 ENO4A6NNW6 628 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 DFFAO00273 331 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 C2CD2LO14523 706 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 LGALS2P05162 132 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 SETSIPP0DME0 302 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 KLRC2P26717 231 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 MRPS35P82673 323 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 COG7P83436 770 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 CDC42EP1Q00587 391 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 BST2Q10589 180 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 MPP2Q14168 576 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 SCUBE1Q8IWY4 988 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 GPR20Q99678 358 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 ELOVL4Q9GZR5 314 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms