RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 NIM1KQ8IY84 436 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 LPAR1Q92633 364 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 FAM136AQ96C01 138 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 SH3GL3Q99963 347 aa21.19■□□□□ 0.98
SSBP3-216ENST00000610401 SIGLEC16A6NMB1 481 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 APOC4-APOC2K7ER74 178 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 TRAFD1O14545 582 aaPredicted RBP21.18■□□□□ 0.98
SSBP3-216ENST00000610401 MICAL2O94851 1124 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 LMNAP02545 664 aaKnown RBP21.18■□□□□ 0.98
SSBP3-216ENST00000610401 APOC2P02655 101 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 SNRPAP09012 282 aaKnown RBP21.18■□□□□ 0.98
SSBP3-216ENST00000610401 STAT5BP51692 787 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 TRNP1Q6NT89 227 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 BRSK2Q8IWQ3 736 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 RNF148Q8N7C7 305 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 NDE1Q9NXR1 346 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 DNAJC16Q9Y2G8 782 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 PLA2G6O60733 806 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 TNNC2P02585 160 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 CD1EP15812 388 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 OSBPP22059 807 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 TCF7P36402 384 aaPredicted RBP21.18■□□□□ 0.98
SSBP3-216ENST00000610401 ZNF132P52740 706 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 TEX264Q9Y6I9 313 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 TRUB2O95900 331 aaKnown RBP21.18■□□□□ 0.98
SSBP3-216ENST00000610401 YWHAEP62258 255 aaKnown RBP21.18■□□□□ 0.98
SSBP3-216ENST00000610401 C6orf163Q5TEZ5 329 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 TTC39BQ5VTQ0 682 aaPredicted RBP21.18■□□□□ 0.98
SSBP3-216ENST00000610401 OR52E8Q6IFG1 317 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 SPNS2Q8IVW8 549 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 TMEM174Q8WUU8 243 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 CPB2Q96IY4 423 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 EBF3Q9H4W6 596 aa21.18■□□□□ 0.98
SSBP3-216ENST00000610401 CPSF2Q9P2I0 782 aaKnown RBP21.18■□□□□ 0.98
SSBP3-216ENST00000610401 HCRTO43612 131 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 ADCY3O60266 1144 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 METTL18O95568 372 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 PROCP04070 461 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 LRRC38Q5VT99 294 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 GMLQ99445 158 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 UNKQ9C0B0 810 aaKnown RBP21.17■□□□□ 0.98
SSBP3-216ENST00000610401 DEFB129Q9H1M3 183 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 DHX33Q9H6R0 707 aaKnown RBP21.17■□□□□ 0.98
SSBP3-216ENST00000610401 INHBEP58166 350 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 PDE1BQ01064 536 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 STYK1Q6J9G0 422 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 TNS4Q8IZW8 715 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 TTC13Q8NBP0 860 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 ELOVL4Q9GZR5 314 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 PNPOQ9NVS9 261 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 STX18Q9P2W9 335 aaKnown RBP21.17■□□□□ 0.98
SSBP3-216ENST00000610401 PLLPQ9Y342 182 aa21.17■□□□□ 0.98
SSBP3-216ENST00000610401 DKC1O60832 514 aaKnown RBP eCLIP21.16■□□□□ 0.98
SSBP3-216ENST00000610401 EIF4BP23588 611 aaKnown RBP21.16■□□□□ 0.98
SSBP3-216ENST00000610401 GBE1Q04446 702 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 LAMTOR4Q0VGL1 99 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 STX3Q13277 289 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 UNC5AQ6ZN44 842 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 RASSF3Q86WH2 238 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 ALKBH8Q96BT7 664 aaKnown RBP21.16■□□□□ 0.98
SSBP3-216ENST00000610401 MINDY3Q9H8M7 445 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 TTLL3Q9Y4R7 772 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 IRGCQ6NXR0 463 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 ANKRD36BP1Q96IX9 119 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 CLMNQ96JQ2 1002 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 MRPL4Q9BYD3 311 aaKnown RBP21.16■□□□□ 0.98
SSBP3-216ENST00000610401 TLE6Q9H808 572 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 ZNF214Q9UL59 606 aaPredicted RBP21.16■□□□□ 0.98
SSBP3-216ENST00000610401 CCDC160A6NGH7 325 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 E7ENQ6 273 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 DGKIO75912 1065 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 PGK2P07205 417 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 AP1B1Q10567 949 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 RBBP5Q15291 538 aaKnown RBP21.16■□□□□ 0.98
SSBP3-216ENST00000610401 DHRS4Q9BTZ2 278 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 RNPEPQ9H4A4 650 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 DHX35Q9H5Z1 703 aaKnown RBP21.16■□□□□ 0.98
SSBP3-216ENST00000610401 PICK1Q9NRD5 415 aa21.16■□□□□ 0.98
SSBP3-216ENST00000610401 hCG_2014768A0A024R1R8 64 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 WDR27A2RRH5 827 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 UBA1P22314 1058 aaKnown RBP21.15■□□□□ 0.98
SSBP3-216ENST00000610401 ARL2P36404 184 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 ASPHQ12797 758 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 ZRSR2Q15696 482 aaKnown RBP21.15■□□□□ 0.98
SSBP3-216ENST00000610401 STXBP2Q15833 593 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 CCDC142Q17RM4 750 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 CAND1Q86VP6 1230 aaKnown RBP21.15■□□□□ 0.98
SSBP3-216ENST00000610401 NCAPG2Q86XI2 1143 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 COPS5Q92905 334 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 XYLT2Q9H1B5 865 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 SYNPO2Q9UMS6 1093 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 GOLGA8QA0A0J9YX86 632 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 GOLGA8OA6NCC3 632 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 GOLGA8NF8WBI6 632 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 H0YCG3 227 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 USP12O75317 370 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 RFPL1O75677 317 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 GRAMD1BQ3KR37 738 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 HSDL1Q3SXM5 330 aa21.15■□□□□ 0.98
SSBP3-216ENST00000610401 FASTKD1Q53R41 847 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms