RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.32
CTCFL-218ENST00000608440 GOLGA8SH3BPF8 625 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 GOLGA8MH3BSY2 632 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 H6PDO95479 791 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 EIF3EP60228 445 aaKnown RBP13.02□□□□□ -0.33
CTCFL-218ENST00000608440 ESRRGP62508 458 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 KRT76Q01546 638 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 EVX2Q03828 476 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 UBE2SQ16763 222 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 KRT80Q6KB66 452 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 TAS2R42Q7RTR8 314 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 OSCP1Q8WVF1 389 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 DNAJC19Q96DA6 116 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 WWP1Q9H0M0 922 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 KCTD10Q9H3F6 313 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 DNAJC16Q9Y2G8 782 aa13.02□□□□□ -0.33
CTCFL-218ENST00000608440 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 M0R2N6 131 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 KPNA4O00629 521 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 TBCAO75347 108 aaKnown RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 DDAH1O94760 285 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 KRT10P13645 584 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 IFNA8P32881 189 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 CASP4P49662 377 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 TRAF2Q12933 501 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 ECM1Q16610 540 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 AARS2Q5JTZ9 985 aaKnown RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 LDLRAP1Q5SW96 308 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 KAZNQ674X7 775 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 GALNT18Q6P9A2 607 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 CENPUQ71F23 418 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 BANPQ8N9N5 519 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 TANKQ92844 425 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 NAA50Q9GZZ1 169 aaKnown RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 C6orf203Q9P0P8 240 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 STK17AQ9UEE5 414 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 BCAP29Q9UHQ4 241 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 ATP8B3O60423 1300 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 AKAP11Q9UKA4 1901 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 CDK2AP1O14519 115 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 TM9SF1O15321 606 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 AKAP3O75969 853 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 IST1P53990 364 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 TMPRSS15P98073 1019 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 NME3Q13232 169 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 GRAPQ13588 217 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 CCNG2Q16589 344 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 PPP6R3Q5H9R7 873 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 TTC23LQ6PF05 361 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 PRR23CQ6ZRP0 262 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 IGFN1Q86VF2 1251 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 LRRC49Q8IUZ0 686 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 DEPDC4Q8N2C3 294 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 CPSF7Q8N684 471 aaKnown RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 GRAPLQ8TC17 118 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 SLCO2A1Q92959 643 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 RPF2Q9H7B2 306 aaKnown RBP13.01□□□□□ -0.33
CTCFL-218ENST00000608440 SATB2Q9UPW6 733 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 BCS1LQ9Y276 419 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 MYRFQ9Y2G1 1151 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
CTCFL-218ENST00000608440 H3BMQ9 156 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 EIF2S1P05198 315 aaKnown RBP13□□□□□ -0.33
CTCFL-218ENST00000608440 ABCB1P08183 1280 aaPredicted RBP13□□□□□ -0.33
CTCFL-218ENST00000608440 MMP10P09238 476 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 ZSCAN5DPP0CG00 497 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 ZNF182P17025 639 aaPredicted RBP13□□□□□ -0.33
CTCFL-218ENST00000608440 COPAP53621 1224 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 MOGQ16653 247 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 PPM1LQ5SGD2 360 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 PGM2L1Q6PCE3 622 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 TMC5Q6UXY8 1006 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 BTLAQ7Z6A9 289 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 GJA10Q969M2 543 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 COG8Q96MW5 612 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 OLFM1Q99784 485 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 GCOM2Q9BZD3 368 aaPredicted RBP13□□□□□ -0.33
CTCFL-218ENST00000608440 VPS45Q9NRW7 570 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 SQORQ9Y6N5 450 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 I3L4J1 428 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 FSCN2O14926 492 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 ATP2A1O14983 1001 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 CLOCKO15516 846 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 ENPP1P22413 925 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 SSTR1P30872 391 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 ACADSBP45954 432 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 GPC5P78333 572 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 DNASE1L3Q13609 305 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 TFDP1Q14186 410 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 ZNF618Q5T7W0 954 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 TRIM72Q6ZMU5 477 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 LILRA2Q8N149 483 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 ZCCHC9Q8N567 271 aaKnown RBP13□□□□□ -0.33
CTCFL-218ENST00000608440 CD101Q93033 1021 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 RMND5BQ96G75 393 aaPredicted RBP13□□□□□ -0.33
CTCFL-218ENST00000608440 C10orf88Q9H8K7 445 aa13□□□□□ -0.33
CTCFL-218ENST00000608440 CPQQ9Y646 472 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms