RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 SULT1E1P49888 294 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 CRYBB1P53674 252 aaPredicted RBP16.55■□□□□ 0.24
CTSA-214ENST00000606788 SLC10A2Q12908 348 aaPredicted RBP16.55■□□□□ 0.24
CTSA-214ENST00000606788 MORF4L2Q15014 288 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 PPIL6Q8IXY8 311 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 TMEM30AQ9NV96 361 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 DDX43Q9NXZ2 648 aaKnown RBP16.55■□□□□ 0.24
CTSA-214ENST00000606788 AP4E1Q9UPM8 1137 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 SNX10Q9Y5X0 201 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 CDH16O75309 829 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 CRADDP78560 199 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 TMEM110Q86TL2 294 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 LRRC52Q8N7C0 313 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 ANKRD52Q8NB46 1076 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 LGMNQ99538 433 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 TSPYL2Q9H2G4 693 aaPredicted RBP16.55■□□□□ 0.24
CTSA-214ENST00000606788 ZFYVE28Q9HCC9 887 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 KRT82Q9NSB4 513 aa16.55■□□□□ 0.24
CTSA-214ENST00000606788 HAS3O00219 553 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 CHRNA1P02708 482 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 F7P08709 466 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 AKR1A1P14550 325 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 BRCC3P46736 316 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 BCAT1P54687 386 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 PRKCZQ05513 592 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 DSTYKQ6XUX3 929 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 GPRIN1Q7Z2K8 1008 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 CTAGE3PQ8IX95 158 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 SENP8Q96LD8 212 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 ZNF317Q96PQ6 595 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 ROPN1BQ9BZX4 212 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 STMN4Q9H169 189 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 ROPN1Q9HAT0 212 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 LRRC4Q9HBW1 653 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 TTC3P53804 2025 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 MANSC4A6NHS7 340 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 CD4P01730 458 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 CCND3P30281 292 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 PCK1P35558 622 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 ARL4CP56559 192 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 FAM133BQ5BKY9 247 aaKnown RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 TTC13Q8NBP0 860 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 ZNF560Q96MR9 790 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 KCTD15Q96SI1 283 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 RASSF4Q9H2L5 321 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 TRMT13Q9NUP7 481 aaKnown RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 MAD1L1Q9Y6D9 718 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 A6NNZ2 444 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 OLIG2Q13516 323 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 NOMO1Q15155 1222 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 TUBB8Q3ZCM7 444 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 MFSD5Q6N075 450 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 DRICH1Q6PGQ1 229 aaPredicted RBP16.54■□□□□ 0.24
CTSA-214ENST00000606788 NT5DC4Q86YG4 428 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 MAP7D3Q8IWC1 876 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 NAT8LQ8N9F0 302 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 TRABDQ9H4I3 376 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 FAM105AQ9NUU6 356 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 PCDH10Q9P2E7 1040 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 NUDT5Q9UKK9 219 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 KIAA1257Q9ULG3 409 aa16.54■□□□□ 0.24
CTSA-214ENST00000606788 NRP1O14786 923 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 USP17L7P0C7H9 530 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 PTPN1P18031 435 aaKnown RBP16.53■□□□□ 0.24
CTSA-214ENST00000606788 CA4P22748 312 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 MRPS6P82932 125 aaKnown RBP16.53■□□□□ 0.24
CTSA-214ENST00000606788 CCDC121Q6ZUS5 278 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 PDIK1LQ8N165 341 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 NME8Q8N427 588 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 CCNYQ8ND76 341 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 DEPDC1BQ8WUY9 529 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 NOD1Q9Y239 953 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 FARP1Q9Y4F1 1045 aaPredicted RBP16.53■□□□□ 0.24
CTSA-214ENST00000606788 KBTBD13C9JR72 458 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 M0QYT0 321 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 AMHP03971 560 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 STAT4Q14765 748 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 SV2CQ496J9 727 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 SIX6OS1Q8N1H7 587 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 GSTCDQ8NEC7 633 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 SLCO1B3Q9NPD5 702 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 UBN1Q9NPG3 1134 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 NKIRAS1Q9NYS0 192 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 IL1RAPL1Q9NZN1 696 aa16.53■□□□□ 0.24
CTSA-214ENST00000606788 CAPN9O14815 690 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 MGEA5O60502 916 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 B3GAT3O94766 335 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 RPA3P35244 121 aaPredicted RBP16.52■□□□□ 0.24
CTSA-214ENST00000606788 TKTL1P51854 596 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 DNAJC3Q13217 504 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 TFDP2Q14188 446 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 KCNT2Q6UVM3 1135 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 PAQR9Q6ZVX9 377 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 AGGF1Q8N302 714 aaeCLIP16.52■□□□□ 0.24
CTSA-214ENST00000606788 CCHCR1Q8TD31 782 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 USP6NLQ92738 828 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 TGS1Q96RS0 853 aaKnown RBP16.52■□□□□ 0.24
CTSA-214ENST00000606788 TMEM109Q9BVC6 243 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 ULBP1Q9BZM6 244 aa16.52■□□□□ 0.24
CTSA-214ENST00000606788 NRDE2Q9H7Z3 1164 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms