RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 FYNP06241 537 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 RARAP10276 462 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 TFE3P19532 575 aaPredicted RBP18.78■□□□□ 0.6
VRK3-225ENST00000601912 DNAJB2P25686 324 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 BMPR1AP36894 532 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 YWHAGP61981 247 aaKnown RBP eCLIP18.78■□□□□ 0.6
VRK3-225ENST00000601912 RAB33AQ14088 237 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 NAA30Q147X3 362 aaPredicted RBP18.78■□□□□ 0.6
VRK3-225ENST00000601912 ELF2Q15723 593 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 SYPL2Q5VXT5 272 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 BTBD8Q5XKL5 378 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 ADAT2Q7Z6V5 191 aaKnown RBP18.78■□□□□ 0.6
VRK3-225ENST00000601912 MON1AQ86VX9 555 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 ARHGAP18Q8N392 663 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 CMASQ8NFW8 434 aaPredicted RBP18.78■□□□□ 0.6
VRK3-225ENST00000601912 TEKT4Q8WW24 435 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 RAPGEF5Q92565 580 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 HSPH1Q92598 858 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 CRISPLD1Q9H336 500 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 ABCC13Q9NSE7 274 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 FNIP2Q9P278 1114 aa18.78■□□□□ 0.6
VRK3-225ENST00000601912 KIAA1671Q9BY89 1806 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 PI4K2BG5E9Z4 385 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 DYNC1I1O14576 645 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 ENDOD1O94919 500 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 CTSAP10619 480 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 RALAP11233 206 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 ATF2P15336 505 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 YWHAQP27348 245 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 CTNNB1P35222 781 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 RDXP35241 583 aaKnown RBP18.77■□□□□ 0.6
VRK3-225ENST00000601912 TFDP3Q5H9I0 405 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 SPOCD1Q6ZMY3 1216 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 MAP7D3Q8IWC1 876 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 SLC7A14Q8TBB6 771 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 EDEM1Q92611 657 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 ACSF2Q96CM8 615 aaPredicted RBP18.77■□□□□ 0.6
VRK3-225ENST00000601912 PEBP4Q96S96 227 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 ZBP1Q9H171 429 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 IL37Q9NZH6 218 aa18.77■□□□□ 0.6
VRK3-225ENST00000601912 LCHNA4D1U4 455 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 SOAT2O75908 522 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 TJP3O95049 919 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 F9P00740 461 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 RHOXF2BP0C7M4 288 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 KDELR1P24390 212 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 CA8P35219 290 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 PTPN7P35236 360 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 DEUP1Q05D60 604 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 GLE1Q53GS7 698 aaKnown RBP18.76■□□□□ 0.59
VRK3-225ENST00000601912 RAB6CQ53S08 254 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 ERMARDQ5T6L9 678 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 MFSD7Q6UXD7 560 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 KLHL7Q8IXQ5 586 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 KRT12Q99456 494 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 RHOXF2Q9BQY4 288 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 RAB6CQ9H0N0 254 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.76■□□□□ 0.59
VRK3-225ENST00000601912 MAFFQ9ULX9 164 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 LZTS1Q9Y250 596 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 MDM4O15151 490 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 ELF1P32519 619 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 NME3Q13232 169 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 PDK2Q15119 407 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 LLGL1Q15334 1064 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 COL13A1Q5TAT6 717 aaPredicted RBP18.76■□□□□ 0.59
VRK3-225ENST00000601912 C8orf74Q6P047 294 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 CYP4V2Q6ZWL3 525 aaPredicted RBP18.76■□□□□ 0.59
VRK3-225ENST00000601912 SND1Q7KZF4 910 aaKnown RBP eCLIP18.76■□□□□ 0.59
VRK3-225ENST00000601912 BNIPLQ7Z465 357 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 GPR152Q8TDT2 470 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 AUTS2Q8WXX7 1259 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 TSC1Q92574 1164 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 PGAP3Q96FM1 320 aaPredicted RBP18.76■□□□□ 0.59
VRK3-225ENST00000601912 HEMGNQ9BXL5 484 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 FAM204AQ9H8W3 233 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 CYP4F11Q9HBI6 524 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 RXFP1Q9HBX9 757 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 EFR3BQ9Y2G0 817 aa18.76■□□□□ 0.59
VRK3-225ENST00000601912 SYNJ2BP-COX16A0A087WUM0 186 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 FAM92AA1XBS5 289 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 LILRB3O75022 631 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 GBP1P32455 592 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 CDKN2BP42772 138 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 CDH6P55285 790 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 KRT81Q14533 505 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 TMC7Q7Z402 723 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 CCDC26Q8TAB7 109 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 RNF139Q8WU17 664 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 FBXO32Q969P5 355 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 SNRNP25Q9BV90 132 aaKnown RBP18.75■□□□□ 0.59
VRK3-225ENST00000601912 ADAM33Q9BZ11 813 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 SLITRK6Q9H5Y7 841 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 HOMER3Q9NSC5 361 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 COX16Q9P0S2 106 aa18.75■□□□□ 0.59
VRK3-225ENST00000601912 hCG_1818297A0A087WSY0 165 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 A0A1W2PQH9 124 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 TCRBV7S2A1N4TA0A589 114 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 LINC01553A4QN01 128 aa18.74■□□□□ 0.59
VRK3-225ENST00000601912 C3orf70A6NLC5 250 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms