RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 TKTL1P51854 596 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 CSTF1Q05048 431 aaKnown RBP18.07■□□□□ 0.48
HERC3-214ENST00000601319 CNGA2Q16280 664 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 MEA1Q16626 185 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 FBXO43Q4G163 708 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 SCML4Q8N228 414 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 ZBTB44Q8NCP5 570 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 CD101Q93033 1021 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 NKD2Q969F2 451 aaPredicted RBP18.07■□□□□ 0.48
HERC3-214ENST00000601319 ZSWIM1Q9BR11 485 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 ZSCAN32Q9NX65 697 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 APEX2Q9UBZ4 518 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 DNMT3LQ9UJW3 386 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 CFAP54Q96N23 3096 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 CHURC1-FNTBB4DL54 471 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 TULP2O00295 520 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 GREM1O60565 184 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 GFRA3O60609 400 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 TBX18O95935 607 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 ZBED1O96006 694 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 OPRD1P41143 372 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 CXCL12P48061 93 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 GALK1P51570 392 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 DHCR24Q15392 516 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 EXOC3L4Q17RC7 722 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 HTR3DQ70Z44 454 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 BHLHA9Q7RTU4 235 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 LRRC4Q9HBW1 653 aa18.06■□□□□ 0.48
HERC3-214ENST00000601319 FBRSL1Q9HCM7 1045 aaKnown RBP18.06■□□□□ 0.48
HERC3-214ENST00000601319 UBE2TQ9NPD8 197 aaPredicted RBP18.06■□□□□ 0.48
HERC3-214ENST00000601319 RIF1Q5UIP0 2472 aaKnown RBP18.06■□□□□ 0.48
HERC3-214ENST00000601319 FAM186AA6NE01 2351 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 HOXC11O43248 304 aaPredicted RBP18.05■□□□□ 0.48
HERC3-214ENST00000601319 LILRB5O75023 590 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 EGFP01133 1207 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 ADH5P11766 374 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 BRD2P25440 801 aaKnown RBP18.05■□□□□ 0.48
HERC3-214ENST00000601319 EEF1GP26641 437 aaKnown RBP18.05■□□□□ 0.48
HERC3-214ENST00000601319 HOXA6P31267 233 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 NRLP54845 237 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 MFAP3P55082 362 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 YWHAGP61981 247 aaKnown RBP eCLIP18.05■□□□□ 0.48
HERC3-214ENST00000601319 SATB1Q01826 763 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 ADIGQ0VDE8 80 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 MIIPQ5JXC2 388 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 C10orf120Q5SQS8 335 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 NAIF1Q69YI7 327 aaPredicted RBP18.05■□□□□ 0.48
HERC3-214ENST00000601319 RHBDF2Q6PJF5 856 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 BBS7Q8IWZ6 715 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 CCDC26Q8TAB7 109 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 UBA3Q8TBC4 463 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 SLC35F5Q8WV83 523 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 EZH1Q92800 747 aaPredicted RBP18.05■□□□□ 0.48
HERC3-214ENST00000601319 TUBGCP2Q9BSJ2 902 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 CRACR2AQ9BSW2 395 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 ULBP1Q9BZM6 244 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 CNGB3Q9NQW8 809 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 LSM7Q9UK45 103 aaKnown RBP18.05■□□□□ 0.48
HERC3-214ENST00000601319 R4GN57 208 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 GVINP1Q7Z2Y8 2422 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 OTOGLQ3ZCN5 2332 aa18.05■□□□□ 0.48
HERC3-214ENST00000601319 M0QYV0 167 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 SCAMP3O14828 347 aaKnown RBP18.04■□□□□ 0.48
HERC3-214ENST00000601319 ATG13O75143 517 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 IRF1P10914 325 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 SLC9A1P19634 815 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 PON1P27169 355 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 TSSK4Q6SA08 328 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 ASCL5Q7RTU5 278 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 CREBRFQ8IUR6 639 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 SIX6OS1Q8N1H7 587 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 ENOX1Q8TC92 643 aaKnown RBP18.04■□□□□ 0.48
HERC3-214ENST00000601319 SHC3Q92529 594 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 WBP2Q969T9 261 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 NDST4Q9H3R1 872 aa18.04■□□□□ 0.48
HERC3-214ENST00000601319 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.03■□□□□ 0.48
HERC3-214ENST00000601319 KCNJ18B7U540 433 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 K7ESF4 209 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 RNF40O75150 1001 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 STC2O76061 302 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 KRT5P13647 590 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 GAD2Q05329 585 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 KCNJ12Q14500 433 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 VWA3BQ502W6 1294 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 LY6G5CQ5SRR4 150 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 Q6ZNB5 142 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 IRGQQ8WZA9 623 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 SECISBP2LQ93073 1101 aaKnown RBP18.03■□□□□ 0.48
HERC3-214ENST00000601319 HSFY1Q96LI6 401 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 SIX2Q9NPC8 291 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 OLA1Q9NTK5 396 aaKnown RBP18.03■□□□□ 0.48
HERC3-214ENST00000601319 NFE2L3Q9Y4A8 694 aa18.03■□□□□ 0.48
HERC3-214ENST00000601319 BECN2A8MW95 431 aa18.02■□□□□ 0.48
HERC3-214ENST00000601319 MDM4O15151 490 aa18.02■□□□□ 0.48
HERC3-214ENST00000601319 MED7O43513 233 aa18.02■□□□□ 0.48
HERC3-214ENST00000601319 LMNAP02545 664 aaKnown RBP18.02■□□□□ 0.48
HERC3-214ENST00000601319 RPL34P49207 117 aaKnown RBP18.02■□□□□ 0.48
HERC3-214ENST00000601319 DAOAP59103 153 aa18.02■□□□□ 0.48
HERC3-214ENST00000601319 COG7P83436 770 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms