RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 TAS2R14Q9NYV8 317 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
TGFB1-204ENST00000600196 PATJQ8NI35 1801 aa12.87□□□□□ -0.35
TGFB1-204ENST00000600196 GREB1Q4ZG55 1949 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 TMEM191CA6NGB0 347 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 SOWAHDA6NJG2 315 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 YJEFN3A6XGL0 299 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 E7ENQ6 273 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 DPYSL4O14531 572 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 DAB1O75553 588 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 ENDOD1O94919 500 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 CSPG5O95196 566 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 OAS1P00973 400 aaKnown RBP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 CCDC175P0C221 793 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 SLC2A3P11169 496 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 GBP1P32455 592 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 ATP5C1P36542 298 aaKnown RBP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 VAV2P52735 878 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 COG7P83436 770 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 RING1Q06587 406 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 MTMR3Q13615 1198 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 CBX2Q14781 532 aaPredicted RBP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 SDHAF4Q5VUM1 108 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 DNAJC24Q6P3W2 148 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 FAM183BPQ6ZVS7 135 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 OTOP3Q7RTS5 596 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 MAFAQ8NHW3 353 aaPredicted RBP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 FEZF2Q8TBJ5 459 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 RNF139Q8WU17 664 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 RFFLQ8WZ73 363 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 AZIN2Q96A70 460 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 ATXN3LQ9H3M9 355 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 ZNF334Q9HCZ1 680 aaPredicted RBP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 KCND1Q9NSA2 647 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 CHORDC1Q9UHD1 332 aaPredicted RBP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 DNMT3LQ9UJW3 386 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 CDH7Q9ULB5 785 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 HBS1LQ9Y450 684 aaKnown RBP12.86□□□□□ -0.35
TGFB1-204ENST00000600196 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
TGFB1-204ENST00000600196 TRAV19A0A0A6YYK7 116 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 GOLGA6L9A6NEM1 432 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 C2CD4BA6NLJ0 364 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 CAPN9O14815 690 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 ZNF263O14978 683 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 ZSCAN12O43309 604 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 MOSPD3O75425 235 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 MYL4P12829 197 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 RARGP13631 454 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 HDCP19113 662 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 RRM1P23921 792 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 ZNF143P52747 638 aaPredicted RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 AIF1P55008 147 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 KIF5AQ12840 1032 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 EIF4EBP2Q13542 120 aaPredicted RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 PIGHQ14442 188 aaPredicted RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 SMAD2Q15796 467 aaKnown RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 SLC25A52Q3SY17 297 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 FAM102AQ5T9C2 384 aaPredicted RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 DCUN1D2Q6PH85 259 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 STRADAQ7RTN6 431 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 C12orf76Q8N812 135 aaPredicted RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 SHKBP1Q8TBC3 707 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 GPR152Q8TDT2 470 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 CENPIQ92674 756 aaPredicted RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 FAM149B1Q96BN6 582 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 ZNF653Q96CK0 615 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 ACSF2Q96CM8 615 aaPredicted RBP12.85□□□□□ -0.35
TGFB1-204ENST00000600196 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 THAP2Q9H0W7 228 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 SPTLC3Q9NUV7 552 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 GMIPQ9P107 970 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 EPS15L1Q9UBC2 864 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 PRKAG3Q9UGI9 489 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 IP6K2Q9UHH9 426 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 ARHGAP26Q9UNA1 814 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 ZNF510Q9Y2H8 683 aa12.85□□□□□ -0.35
TGFB1-204ENST00000600196 A0A1W2PQH9 124 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 MYO1FO00160 1098 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 MBTPS2O43462 519 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 KRT86O43790 486 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 TLR5O60602 858 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 LATS1O95835 1130 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 IGLV3-25P01717 112 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 FYNP06241 537 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 SDC4P31431 198 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
TGFB1-204ENST00000600196 MAN1A1P33908 653 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 RBM10P98175 930 aaKnown RBP12.84□□□□□ -0.35
TGFB1-204ENST00000600196 SKIV2LQ15477 1246 aaKnown RBP12.84□□□□□ -0.35
TGFB1-204ENST00000600196 BNIPLQ7Z465 357 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 UNC45BQ8IWX7 931 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
TGFB1-204ENST00000600196 CMTM8Q8IZV2 173 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms