RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 NFATC1O95644 943 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 TBX18O95935 607 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 CYP17A1P05093 508 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 RARGP13631 454 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 KRT5P13647 590 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 GPD2P43304 727 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 DAOAP59103 153 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 ANGPT1Q15389 498 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 C1orf210Q8IVY1 113 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 TTC8Q8TAM2 541 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 HSFY1Q96LI6 401 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 LRRC4Q9HBW1 653 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 PLCB1Q9NQ66 1216 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 PRMT8Q9NR22 394 aaPredicted RBP16.95■□□□□ 0.3
TRIM28-213ENST00000598355 TAB2Q9NYJ8 693 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 TBC1D14Q9P2M4 693 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 LIMA1Q9UHB6 759 aaKnown RBP16.95■□□□□ 0.3
TRIM28-213ENST00000598355 DNAJC12Q9UKB3 198 aa16.95■□□□□ 0.3
TRIM28-213ENST00000598355 MYO18AQ92614 2054 aaKnown RBP16.95■□□□□ 0.3
TRIM28-213ENST00000598355 LRRC10BA6NIK2 292 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 GNA15P30679 374 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 YWHAGP61981 247 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRIM28-213ENST00000598355 GAS6Q14393 721 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 PON2Q15165 354 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 ARHGAP44Q17R89 818 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 DGKKQ5KSL6 1271 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 KLHDC7AQ5VTJ3 777 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 Q6ZNB5 142 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 HTR3DQ70Z44 454 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 TADA2BQ86TJ2 420 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 FAM71AQ8IYT1 594 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 ADGRG2Q8IZP9 1017 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 STK32AQ8WU08 396 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 ZNF606Q8WXB4 792 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 GANQ9H2C0 597 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 ACP6Q9NPH0 428 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 DNMT3LQ9UJW3 386 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 PCDHGC3Q9UN70 934 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 FHOD1Q9Y613 1164 aa16.94■□□□□ 0.3
TRIM28-213ENST00000598355 DMDP11532 3685 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 YJEFN3A6XGL0 299 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 E7ENQ6 273 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 H0Y858 1186 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 MDM4O15151 490 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 MED7O43513 233 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 RALAP11233 206 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 UCHL3P15374 230 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 OPRD1P41143 372 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 EIF2DP41214 584 aaKnown RBP16.93■□□□□ 0.3
TRIM28-213ENST00000598355 AMPD2Q01433 879 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 LRRC32Q14392 662 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 NAIF1Q69YI7 327 aaPredicted RBP16.93■□□□□ 0.3
TRIM28-213ENST00000598355 FSTL4Q6MZW2 842 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 MSANTD2Q6P1R3 559 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 SYNPOQ8N3V7 929 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 IRGQQ8WZA9 623 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 EZH1Q92800 747 aaPredicted RBP16.93■□□□□ 0.3
TRIM28-213ENST00000598355 CYTH4Q9UIA0 394 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 NUDT5Q9UKK9 219 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 FBXO4Q9UKT5 387 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 SIK3Q9Y2K2 1263 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 EML5Q05BV3 1969 aa16.93■□□□□ 0.3
TRIM28-213ENST00000598355 LGALS16A8MUM7 142 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 HOXC11O43248 304 aaPredicted RBP16.92■□□□□ 0.3
TRIM28-213ENST00000598355 STC2O76061 302 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 LETM1O95202 739 aaPredicted RBP16.92■□□□□ 0.3
TRIM28-213ENST00000598355 PAPSS2O95340 614 aaPredicted RBP16.92■□□□□ 0.3
TRIM28-213ENST00000598355 TDGF1P13385 188 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 CLCN1P35523 988 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 NBL1P41271 181 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 RGS7P49802 495 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 COPB1P53618 953 aaKnown RBP16.92■□□□□ 0.3
TRIM28-213ENST00000598355 MTAPQ13126 283 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 NR1H3Q13133 447 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 DHCR24Q15392 516 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 ANO6Q4KMQ2 910 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 C10orf120Q5SQS8 335 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 DENND1BQ6P3S1 775 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 RHBDF2Q6PJF5 856 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 BBS7Q8IWZ6 715 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 SIX6OS1Q8N1H7 587 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 AOPEPQ8N6M6 819 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 NDRG1Q92597 394 aaKnown RBP16.92■□□□□ 0.3
TRIM28-213ENST00000598355 NELL1Q92832 810 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 SLC4A5Q9BY07 1137 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 NACA2Q9H009 215 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 LMAN1LQ9HAT1 526 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 OLA1Q9NTK5 396 aaKnown RBP16.92■□□□□ 0.3
TRIM28-213ENST00000598355 RBM12Q9NTZ6 932 aaKnown RBP16.92■□□□□ 0.3
TRIM28-213ENST00000598355 SH3BP1Q9Y3L3 701 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 DAAM1Q9Y4D1 1078 aa16.92■□□□□ 0.3
TRIM28-213ENST00000598355 USP34Q70CQ2 3546 aa16.91■□□□□ 0.3
TRIM28-213ENST00000598355 PROB1E7EW31 1015 aa16.91■□□□□ 0.3
TRIM28-213ENST00000598355 FOXN3O00409 490 aaPredicted RBP16.91■□□□□ 0.3
TRIM28-213ENST00000598355 SCAMP3O14828 347 aaKnown RBP16.91■□□□□ 0.3
TRIM28-213ENST00000598355 THAP12O43422 761 aa16.91■□□□□ 0.3
TRIM28-213ENST00000598355 FBXO21O94952 628 aa16.91■□□□□ 0.3
TRIM28-213ENST00000598355 PNMA6AP0CW24 399 aaPredicted RBP16.91■□□□□ 0.3
TRIM28-213ENST00000598355 CHRM1P11229 460 aaPredicted RBP16.91■□□□□ 0.3
TRIM28-213ENST00000598355 PTMSP20962 102 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms