RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 GRIA2P42262 883 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 TNFRSF4P43489 277 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 FMO5P49326 533 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 CCDC40Q4G0X9 1142 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 C2orf27AQ580R0 203 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 KLHL10Q6JEL2 608 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 TTI2Q6NXR4 508 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 CACNA2D4Q7Z3S7 1137 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 NELFBQ8WX92 580 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 CDK5RAP1Q96SZ6 601 aaKnown RBP24.23■■□□□ 1.47
SSBP4-205ENST00000598159 CLIC5Q9NZA1 410 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 NAGPAQ9UK23 515 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 LSM7Q9UK45 103 aaKnown RBP24.23■■□□□ 1.47
SSBP4-205ENST00000598159 KIAA1257Q9ULG3 409 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 USP18Q9UMW8 372 aa24.23■■□□□ 1.47
SSBP4-205ENST00000598159 PRR5-ARHGAP8B1AHC4 643 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 HOXC11O43248 304 aaPredicted RBP24.22■■□□□ 1.47
SSBP4-205ENST00000598159 KAT7O95251 611 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 CCDC192P0DO97 292 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 SEC13P55735 322 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 ARHGAP8P85298 464 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 SPEM2Q0P670 501 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 CETN1Q12798 172 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 PUM1Q14671 1186 aaKnown RBP eCLIP24.22■■□□□ 1.47
SSBP4-205ENST00000598159 HSF5Q4G112 596 aaPredicted RBP24.22■■□□□ 1.47
SSBP4-205ENST00000598159 NUDT18Q6ZVK8 323 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 SCD5Q86SK9 330 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 ARHGAP18Q8N392 663 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 FAM160A2Q8N612 972 aaPredicted RBP24.22■■□□□ 1.47
SSBP4-205ENST00000598159 WBP2Q969T9 261 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 LOXL4Q96JB6 756 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 HHIPQ96QV1 700 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 ARHGEF4Q9NR80 690 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 RALGAPA1Q6GYQ0 2036 aa24.22■■□□□ 1.47
SSBP4-205ENST00000598159 KIAA1549LQ6ZVL6 1849 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 P4HA2O15460 535 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 GREM1O60565 184 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 GNA14O95837 355 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 LMNB2Q03252 620 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 SGO2Q562F6 1265 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 RAB41Q5JT25 222 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 C10orf120Q5SQS8 335 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 PIGZQ86VD9 579 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 C12orf40Q86WS4 652 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 TMEM25Q86YD3 366 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 MMP17Q9ULZ9 603 aa24.21■■□□□ 1.47
SSBP4-205ENST00000598159 BIN1O00499 593 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 VDRP11473 427 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 LRMPQ12912 555 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 ANO4Q32M45 955 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 ETFBKMTQ8IXQ9 262 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 PARD6AQ9NPB6 346 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 DLL3Q9NYJ7 618 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 WDR35Q9P2L0 1181 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 DEC1Q9P2X7 70 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 NUDT5Q9UKK9 219 aa24.2■■□□□ 1.46
SSBP4-205ENST00000598159 COG7P83436 770 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 RSPO4Q2I0M5 234 aaPredicted RBP24.19■■□□□ 1.46
SSBP4-205ENST00000598159 NAT16Q8N8M0 369 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 TRIML1Q8N9V2 468 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 TSTD1Q8NFU3 115 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 KCNV2Q8TDN2 545 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 ZC3H10Q96K80 434 aaKnown RBP24.19■■□□□ 1.46
SSBP4-205ENST00000598159 NT5C1BQ96P26 610 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 HESX1Q9UBX0 185 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 TSPAN16Q9UKR8 245 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 CTNND2Q9UQB3 1225 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 ZNF510Q9Y2H8 683 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 SPAG17Q6Q759 2223 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 WDR87Q6ZQQ6 2873 aa24.19■■□□□ 1.46
SSBP4-205ENST00000598159 TBC1D3BA6NDS4 549 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 XPO1O14980 1071 aaKnown RBP24.18■■□□□ 1.46
SSBP4-205ENST00000598159 FOXD2O60548 495 aaPredicted RBP24.18■■□□□ 1.46
SSBP4-205ENST00000598159 TULP3O75386 442 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 KIR2DL1P43626 348 aaPredicted RBP24.18■■□□□ 1.46
SSBP4-205ENST00000598159 DGKEP52429 567 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 BCAT1P54687 386 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 UBE2HP62256 183 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 MESP2Q0VG99 397 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 PAK1Q13153 545 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 CRY1Q16526 586 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 CSRP2Q16527 193 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 PM20D1Q6GTS8 502 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 TTC30AQ86WT1 665 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 PHTF2Q8N3S3 785 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 CCDC33Q8N5R6 958 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 UBR7Q8N806 425 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 XPO6Q96QU8 1125 aaKnown RBP24.18■■□□□ 1.46
SSBP4-205ENST00000598159 SEMA4GQ9NTN9 838 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 EML5Q05BV3 1969 aa24.18■■□□□ 1.46
SSBP4-205ENST00000598159 MYO18AQ92614 2054 aaKnown RBP24.17■■□□□ 1.46
SSBP4-205ENST00000598159 MDM4O15151 490 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 FGFR1OPO95684 399 aaKnown RBP24.17■■□□□ 1.46
SSBP4-205ENST00000598159 PAEPP09466 180 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 CD19P15391 556 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 TIE1P35590 1138 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 TKTL1P51854 596 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 MARSP56192 900 aaKnown RBP24.17■■□□□ 1.46
SSBP4-205ENST00000598159 PDE4CQ08493 712 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 BST2Q10589 180 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms