RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 ZXDBP98169 803 aa21.31■■□□□ 1
PNKP-211ENST00000598020 USP4Q13107 963 aa21.31■■□□□ 1
PNKP-211ENST00000598020 ZNF77Q15935 545 aa21.31■■□□□ 1
PNKP-211ENST00000598020 BTBD8Q5XKL5 378 aa21.31■■□□□ 1
PNKP-211ENST00000598020 DDX42Q86XP3 938 aaKnown RBP eCLIP21.31■■□□□ 1
PNKP-211ENST00000598020 ZDHHC17Q8IUH5 632 aa21.31■■□□□ 1
PNKP-211ENST00000598020 GPIHBP1Q8IV16 184 aa21.31■■□□□ 1
PNKP-211ENST00000598020 IPO4Q8TEX9 1081 aaKnown RBP21.31■■□□□ 1
PNKP-211ENST00000598020 CLEC4CQ8WTT0 213 aa21.31■■□□□ 1
PNKP-211ENST00000598020 CPLX3Q8WVH0 158 aa21.31■■□□□ 1
PNKP-211ENST00000598020 KHSRPQ92945 711 aaKnown RBP eCLIP21.31■■□□□ 1
PNKP-211ENST00000598020 MRFAP1L1Q96HT8 127 aa21.31■■□□□ 1
PNKP-211ENST00000598020 ZFRQ96KR1 1074 aaKnown RBP21.31■■□□□ 1
PNKP-211ENST00000598020 PCDHB18PQ96TA0 734 aa21.31■■□□□ 1
PNKP-211ENST00000598020 TRMT61BQ9BVS5 477 aaKnown RBP21.31■■□□□ 1
PNKP-211ENST00000598020 MIS12Q9H081 205 aa21.31■■□□□ 1
PNKP-211ENST00000598020 ASNSD1Q9NWL6 643 aa21.31■■□□□ 1
PNKP-211ENST00000598020 DNMT3LQ9UJW3 386 aa21.31■■□□□ 1
PNKP-211ENST00000598020 CPQQ9Y646 472 aa21.31■■□□□ 1
PNKP-211ENST00000598020 KIF26AQ9ULI4 1882 aaPredicted RBP21.3■■□□□ 1
PNKP-211ENST00000598020 CHADO15335 359 aa21.3■■□□□ 1
PNKP-211ENST00000598020 LTFP02788 710 aa21.3■■□□□ 1
PNKP-211ENST00000598020 GLI1P08151 1106 aa21.3■■□□□ 1
PNKP-211ENST00000598020 HNRNPH3P31942 346 aaKnown RBP21.3■■□□□ 1
PNKP-211ENST00000598020 ZXDAP98168 799 aa21.3■■□□□ 1
PNKP-211ENST00000598020 ARID5BQ14865 1188 aa21.3■■□□□ 1
PNKP-211ENST00000598020 NAA35Q5VZE5 725 aa21.3■■□□□ 1
PNKP-211ENST00000598020 HFE2Q6ZVN8 426 aa21.3■■□□□ 1
PNKP-211ENST00000598020 ERICH1Q86X53 443 aa21.3■■□□□ 1
PNKP-211ENST00000598020 MSANTD4Q8NCY6 345 aa21.3■■□□□ 1
PNKP-211ENST00000598020 OLIG1Q8TAK6 271 aa21.3■■□□□ 1
PNKP-211ENST00000598020 SH3RF2Q8TEC5 729 aa21.3■■□□□ 1
PNKP-211ENST00000598020 GOLGA1Q92805 767 aa21.3■■□□□ 1
PNKP-211ENST00000598020 TRIM62Q9BVG3 475 aa21.3■■□□□ 1
PNKP-211ENST00000598020 NACA2Q9H009 215 aa21.3■■□□□ 1
PNKP-211ENST00000598020 HAUS4Q9H6D7 363 aa21.3■■□□□ 1
PNKP-211ENST00000598020 TRPV5Q9NQA5 729 aa21.3■■□□□ 1
PNKP-211ENST00000598020 OLA1Q9NTK5 396 aaKnown RBP21.3■■□□□ 1
PNKP-211ENST00000598020 TJP2Q9UDY2 1190 aa21.3■■□□□ 1
PNKP-211ENST00000598020 BZW2Q9Y6E2 419 aaKnown RBP21.3■■□□□ 1
PNKP-211ENST00000598020 LEFTY2O00292 366 aa21.29■■□□□ 1
PNKP-211ENST00000598020 NARSO43776 548 aaKnown RBP21.29■■□□□ 1
PNKP-211ENST00000598020 TBX18O95935 607 aa21.29■■□□□ 1
PNKP-211ENST00000598020 ERBB2P04626 1255 aa21.29■■□□□ 1
PNKP-211ENST00000598020 SCNN1AP37088 669 aa21.29■■□□□ 1
PNKP-211ENST00000598020 ZNF75DP51815 510 aa21.29■■□□□ 1
PNKP-211ENST00000598020 GPC5P78333 572 aa21.29■■□□□ 1
PNKP-211ENST00000598020 CENPCQ03188 943 aa21.29■■□□□ 1
PNKP-211ENST00000598020 KLHL30Q0D2K2 578 aa21.29■■□□□ 1
PNKP-211ENST00000598020 CLEC16AQ2KHT3 1053 aa21.29■■□□□ 1
PNKP-211ENST00000598020 ARHGAP29Q52LW3 1261 aa21.29■■□□□ 1
PNKP-211ENST00000598020 C10orf120Q5SQS8 335 aa21.29■■□□□ 1
PNKP-211ENST00000598020 HGSNATQ68CP4 663 aa21.29■■□□□ 1
PNKP-211ENST00000598020 DRC7Q8IY82 874 aa21.29■■□□□ 1
PNKP-211ENST00000598020 RIN3Q8TB24 985 aa21.29■■□□□ 1
PNKP-211ENST00000598020 CPA5Q8WXQ8 436 aa21.29■■□□□ 1
PNKP-211ENST00000598020 EDAQ92838 391 aa21.29■■□□□ 1
PNKP-211ENST00000598020 C18orf8Q96DM3 657 aa21.29■■□□□ 1
PNKP-211ENST00000598020 KLF16Q9BXK1 252 aaPredicted RBP21.29■■□□□ 1
PNKP-211ENST00000598020 SYNCQ9H7C4 482 aa21.29■■□□□ 1
PNKP-211ENST00000598020 THG1LQ9NWX6 298 aaKnown RBP21.29■■□□□ 1
PNKP-211ENST00000598020 FYNP06241 537 aa21.28■■□□□ 1
PNKP-211ENST00000598020 MMP8P22894 467 aa21.28■■□□□ 1
PNKP-211ENST00000598020 PFKPQ01813 784 aa21.28■■□□□ 1
PNKP-211ENST00000598020 SLC6A3Q01959 620 aa21.28■■□□□ 1
PNKP-211ENST00000598020 TBX2Q13207 712 aaPredicted RBP21.28■■□□□ 1
PNKP-211ENST00000598020 GRM2Q14416 872 aa21.28■■□□□ 1
PNKP-211ENST00000598020 MTF1Q14872 753 aa21.28■■□□□ 1
PNKP-211ENST00000598020 EFHC1Q5JVL4 640 aa21.28■■□□□ 1
PNKP-211ENST00000598020 PPP1R2P3Q6NXS1 205 aa21.28■■□□□ 1
PNKP-211ENST00000598020 MSANTD2Q6P1R3 559 aa21.28■■□□□ 1
PNKP-211ENST00000598020 OLFML1Q6UWY5 402 aa21.28■■□□□ 1
PNKP-211ENST00000598020 ZNF571Q7Z3V5 609 aaPredicted RBP21.28■■□□□ 1
PNKP-211ENST00000598020 PHF13Q86YI8 300 aaPredicted RBP21.28■■□□□ 1
PNKP-211ENST00000598020 YAF2Q8IY57 180 aa21.28■■□□□ 1
PNKP-211ENST00000598020 DNASE1L2Q92874 299 aa21.28■■□□□ 1
PNKP-211ENST00000598020 IRF7Q92985 503 aa21.28■■□□□ 1
PNKP-211ENST00000598020 DNAJC7Q99615 494 aa21.28■■□□□ 1
PNKP-211ENST00000598020 SMOC2Q9H3U7 446 aa21.28■■□□□ 1
PNKP-211ENST00000598020 NUDT5Q9UKK9 219 aa21.28■■□□□ 1
PNKP-211ENST00000598020 ARNTLO00327 626 aa21.27■■□□□ 1
PNKP-211ENST00000598020 ZNF263O14978 683 aa21.27■■□□□ 1
PNKP-211ENST00000598020 SERPING1P05155 500 aa21.27■■□□□ 1
PNKP-211ENST00000598020 TPM1P09493 284 aa21.27■■□□□ 1
PNKP-211ENST00000598020 TNFAIP3P21580 790 aa21.27■■□□□ 1
PNKP-211ENST00000598020 GDI1P31150 447 aa21.27■■□□□ 1
PNKP-211ENST00000598020 YWHAZP63104 245 aaKnown RBP21.27■■□□□ 1
PNKP-211ENST00000598020 OR6B2Q6IFH4 312 aa21.27■■□□□ 1
PNKP-211ENST00000598020 TOGARAM2Q6ZUX3 1019 aa21.27■■□□□ 1
PNKP-211ENST00000598020 FAM183BPQ6ZVS7 135 aa21.27■■□□□ 1
PNKP-211ENST00000598020 RSRC2Q7L4I2 434 aaKnown RBP21.27■■□□□ 1
PNKP-211ENST00000598020 SLC26A9Q7LBE3 791 aa21.27■■□□□ 1
PNKP-211ENST00000598020 OR8K1Q8NGG5 319 aa21.27■■□□□ 1
PNKP-211ENST00000598020 RNF139Q8WU17 664 aa21.27■■□□□ 1
PNKP-211ENST00000598020 EDEM1Q92611 657 aa21.27■■□□□ 1
PNKP-211ENST00000598020 FAM83CQ9BQN1 747 aa21.27■■□□□ 1
PNKP-211ENST00000598020 BRD9Q9H8M2 597 aa21.27■■□□□ 1
PNKP-211ENST00000598020 POPDC2Q9HBU9 364 aa21.27■■□□□ 1
PNKP-211ENST00000598020 SMPD4Q9NXE4 827 aa21.27■■□□□ 1
PNKP-211ENST00000598020 WNT16Q9UBV4 365 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms