RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SNX16P57768 344 aa20.26■□□□□ 0.83
PNKP-207ENST00000596014 SLC7A9P82251 487 aa20.26■□□□□ 0.83
PNKP-207ENST00000596014 TBX2Q13207 712 aaPredicted RBP20.26■□□□□ 0.83
PNKP-207ENST00000596014 ZNF268Q14587 947 aaPredicted RBP20.26■□□□□ 0.83
PNKP-207ENST00000596014 HFE2Q6ZVN8 426 aa20.26■□□□□ 0.83
PNKP-207ENST00000596014 ZNF571Q7Z3V5 609 aaPredicted RBP20.26■□□□□ 0.83
PNKP-207ENST00000596014 CELF5Q8N6W0 485 aaKnown RBP20.26■□□□□ 0.83
PNKP-207ENST00000596014 LRRC3BQ96PB8 259 aa20.26■□□□□ 0.83
PNKP-207ENST00000596014 SYNCQ9H7C4 482 aa20.26■□□□□ 0.83
PNKP-207ENST00000596014 SEPT11Q9NVA2 429 aaKnown RBP20.26■□□□□ 0.83
PNKP-207ENST00000596014 NUDT5Q9UKK9 219 aa20.26■□□□□ 0.83
PNKP-207ENST00000596014 HEPACAM2A8MVW5 462 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 GOLGA6L6A8MZA4 724 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 DPYSL4O14531 572 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 SART1O43290 800 aaKnown RBP20.25■□□□□ 0.83
PNKP-207ENST00000596014 ERBB2P04626 1255 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 TPM1P09493 284 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 MBL2P11226 248 aaPredicted RBP20.25■□□□□ 0.83
PNKP-207ENST00000596014 TNFAIP3P21580 790 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 CDC25BP30305 580 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 ATP5C1P36542 298 aaKnown RBP20.25■□□□□ 0.83
PNKP-207ENST00000596014 TDGQ13569 410 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 CLEC16AQ2KHT3 1053 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 BTBD8Q5XKL5 378 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 HGSNATQ68CP4 663 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 VITQ6UXI7 678 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 OLIG1Q8TAK6 271 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 IPO4Q8TEX9 1081 aaKnown RBP20.25■□□□□ 0.83
PNKP-207ENST00000596014 C18orf8Q96DM3 657 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 NACA2Q9H009 215 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 OBP2AQ9NY56 170 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 ARHGAP26Q9UNA1 814 aa20.25■□□□□ 0.83
PNKP-207ENST00000596014 BZW2Q9Y6E2 419 aaKnown RBP20.25■□□□□ 0.83
PNKP-207ENST00000596014 HNRNPH3P31942 346 aaKnown RBP20.24■□□□□ 0.83
PNKP-207ENST00000596014 GABRB2P47870 512 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 ZXDBP98169 803 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 KLHDC10Q6PID8 442 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 MFSD6LQ8IWD5 586 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 OR8K1Q8NGG5 319 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 SLC30A5Q8TAD4 765 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 EDEM1Q92611 657 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 CDK5RAP1Q96SZ6 601 aaKnown RBP20.24■□□□□ 0.83
PNKP-207ENST00000596014 KIF9Q9HAQ2 790 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 ABCC13Q9NSE7 274 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 MUTYHQ9UIF7 546 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 SORCS3Q9UPU3 1222 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 CPQQ9Y646 472 aa20.24■□□□□ 0.83
PNKP-207ENST00000596014 LTFP02788 710 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 SERPING1P05155 500 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 CENPCQ03188 943 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 ARID5BQ14865 1188 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 C10orf120Q5SQS8 335 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 OR6B2Q6IFH4 312 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 TADA2BQ86TJ2 420 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 GOLGA1Q92805 767 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 PIWIL1Q96J94 861 aaKnown RBP20.23■□□□□ 0.83
PNKP-207ENST00000596014 DNAJC7Q99615 494 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 COL25A1Q9BXS0 654 aaPredicted RBP20.23■□□□□ 0.83
PNKP-207ENST00000596014 SMPD4Q9NXE4 827 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 CUL9Q8IWT3 2517 aa20.23■□□□□ 0.83
PNKP-207ENST00000596014 MFAP3LO75121 409 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 PSMC3P17980 439 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 MMP8P22894 467 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 ADKP55263 362 aaKnown RBP20.22■□□□□ 0.83
PNKP-207ENST00000596014 GOLGA8FQ08AF8 430 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 GOLGA8DPQ0D2H9 430 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 C2CD6Q53TS8 623 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 FAM183BPQ6ZVS7 135 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 RSRC2Q7L4I2 434 aaKnown RBP20.22■□□□□ 0.83
PNKP-207ENST00000596014 ZDHHC17Q8IUH5 632 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 DRC7Q8IY82 874 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 SPC24Q8NBT2 197 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 MSANTD4Q8NCY6 345 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 RIN3Q8TB24 985 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 BPIFB1Q8TDL5 484 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 FAM149B1Q96BN6 582 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 DNMT3LQ9UJW3 386 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 MDM4O15151 490 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 FYNP06241 537 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 NSFP46459 744 aaKnown RBP20.22■□□□□ 0.83
PNKP-207ENST00000596014 YWHAZP63104 245 aaKnown RBP20.22■□□□□ 0.83
PNKP-207ENST00000596014 SLC6A3Q01959 620 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 FCHO2Q0JRZ9 810 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 GRM2Q14416 872 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 TAF5Q15542 800 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 TDRD12Q587J7 1177 aaKnown RBP20.22■□□□□ 0.83
PNKP-207ENST00000596014 WDR59Q6PJI9 974 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 OLFML1Q6UWY5 402 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 MMS22LQ6ZRQ5 1243 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 SH3RF2Q8TEC5 729 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 RNF139Q8WU17 664 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 DEPDC1BQ8WUY9 529 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 ZFRQ96KR1 1074 aaKnown RBP20.22■□□□□ 0.83
PNKP-207ENST00000596014 SMOC2Q9H3U7 446 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 GKN1Q9NS71 199 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 ABHD10Q9NUJ1 306 aa20.22■□□□□ 0.83
PNKP-207ENST00000596014 LEFTY2O00292 366 aa20.21■□□□□ 0.83
PNKP-207ENST00000596014 NARSO43776 548 aaKnown RBP20.21■□□□□ 0.83
PNKP-207ENST00000596014 ZNF500O60304 480 aaPredicted RBP20.21■□□□□ 0.83
PNKP-207ENST00000596014 PLEKP08567 350 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms