RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 PHTF2Q8N3S3 785 aa18.9■□□□□ 0.62
HOMER3-208ENST00000595756 C12orf50Q8NA57 414 aaPredicted RBP18.9■□□□□ 0.62
HOMER3-208ENST00000595756 FAXDC2Q96IV6 333 aa18.9■□□□□ 0.62
HOMER3-208ENST00000595756 DNAI2Q9GZS0 605 aa18.9■□□□□ 0.62
HOMER3-208ENST00000595756 NACA2Q9H009 215 aa18.9■□□□□ 0.62
HOMER3-208ENST00000595756 CYLDQ9NQC7 956 aa18.9■□□□□ 0.62
HOMER3-208ENST00000595756 ARHGEF4Q9NR80 690 aa18.9■□□□□ 0.62
HOMER3-208ENST00000595756 SCML2Q9UQR0 700 aa18.9■□□□□ 0.62
HOMER3-208ENST00000595756 SDK1Q7Z5N4 2213 aa18.9■□□□□ 0.62
HOMER3-208ENST00000595756 A0A0A0MRY4 1105 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 DCDC2BA2VCK2 349 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 PPP1R3GB7ZBB8 358 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 HHLA1C9JL84 531 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 GDF9O60383 454 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 RHOBTB1O94844 696 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 BMP6P22004 513 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 GRIA2P42262 883 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 SLC6A11P48066 632 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 DGKEP52429 567 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 MESP2Q0VG99 397 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 PAK1Q13153 545 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 CRY1Q16526 586 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 PREPLQ4J6C6 727 aaPredicted RBP18.89■□□□□ 0.61
HOMER3-208ENST00000595756 KRT39Q6A163 491 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 GPRIN1Q7Z2K8 1008 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 BBS7Q8IWZ6 715 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 ETFBKMTQ8IXQ9 262 aa18.89■□□□□ 0.61
HOMER3-208ENST00000595756 CYP26A1O43174 497 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 TNFRSF4P43489 277 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 MXI1P50539 228 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 KDSRQ06136 332 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 SF3A2Q15428 464 aaKnown RBP18.88■□□□□ 0.61
HOMER3-208ENST00000595756 KLHL40Q2TBA0 621 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 BTBD8Q5XKL5 378 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 ANKRD40Q6AI12 368 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 ANO7Q6IWH7 933 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 KLHL10Q6JEL2 608 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 SFTPA1Q8IWL2 248 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 TTC39CQ8N584 583 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 IL17RCQ8NAC3 791 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 MDGA1Q8NFP4 955 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 WHAMMQ8TF30 809 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 NELFBQ8WX92 580 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 DDX1Q92499 740 aaKnown RBP18.88■□□□□ 0.61
HOMER3-208ENST00000595756 CYFIP2Q96F07 1278 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 CEP63Q96MT8 703 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 FAM124BQ9H5Z6 455 aaPredicted RBP18.88■□□□□ 0.61
HOMER3-208ENST00000595756 MMRN2Q9H8L6 949 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.88■□□□□ 0.612e-12■■■■■ 298.1
HOMER3-208ENST00000595756 SPHK2Q9NRA0 654 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 VPS45Q9NRW7 570 aa18.88■□□□□ 0.61
HOMER3-208ENST00000595756 TNRC6BQ9UPQ9 1833 aaKnown RBP18.88■□□□□ 0.61
HOMER3-208ENST00000595756 STX10O60499 249 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 GREM1O60565 184 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 ALDH1A2O94788 518 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 FGFR1OPO95684 399 aaKnown RBP18.87■□□□□ 0.61
HOMER3-208ENST00000595756 IRF1P10914 325 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 EPB41P11171 864 aaKnown RBP18.87■□□□□ 0.61
HOMER3-208ENST00000595756 CD44P16070 742 aaKnown RBP18.87■□□□□ 0.61
HOMER3-208ENST00000595756 CD58P19256 250 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 KIR2DL1P43626 348 aaPredicted RBP18.87■□□□□ 0.61
HOMER3-208ENST00000595756 PGFP49763 221 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 CCDC6Q16204 474 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 USP39Q53GS9 565 aaKnown RBP18.87■□□□□ 0.61
HOMER3-208ENST00000595756 EOGTQ5NDL2 527 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 PMS2CLQ68D20 193 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 KLHDC10Q6PID8 442 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 SASS6Q6UVJ0 657 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 THADAQ6YHU6 1953 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 CCDC33Q8N5R6 958 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 ALLCQ8N6M5 410 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 TXNDC5Q8NBS9 432 aaKnown RBP18.87■□□□□ 0.61
HOMER3-208ENST00000595756 KLF16Q9BXK1 252 aaPredicted RBP18.87■□□□□ 0.61
HOMER3-208ENST00000595756 TPSD1Q9BZJ3 242 aa18.87■□□□□ 0.61
HOMER3-208ENST00000595756 ANTXRLA6NF34 631 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 DCLK1O15075 740 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 SLC16A3O15427 465 aaKnown RBP18.86■□□□□ 0.61
HOMER3-208ENST00000595756 TULP3O75386 442 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 LETM1O95202 739 aaPredicted RBP18.86■□□□□ 0.61
HOMER3-208ENST00000595756 KLF8O95600 359 aaPredicted RBP18.86■□□□□ 0.61
HOMER3-208ENST00000595756 ACO1P21399 889 aaKnown RBP18.86■□□□□ 0.61
HOMER3-208ENST00000595756 TIE1P35590 1138 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 ATP5C1P36542 298 aaKnown RBP18.86■□□□□ 0.61
HOMER3-208ENST00000595756 PSEN1P49768 467 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 TMEM92Q6UXU6 159 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 HTR3DQ70Z44 454 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 TRMT11Q7Z4G4 463 aaKnown RBP18.86■□□□□ 0.61
HOMER3-208ENST00000595756 ZC3H3Q8IXZ2 948 aaKnown RBP18.86■□□□□ 0.61
HOMER3-208ENST00000595756 TERB1Q8NA31 727 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 FBXL13Q8NEE6 735 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 OLIG1Q8TAK6 271 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 KCNV2Q8TDN2 545 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 WBP2Q969T9 261 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 JAKMIP2Q96AA8 810 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.86■□□□□ 0.61
HOMER3-208ENST00000595756 OSER1Q9NX31 292 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 RWDD2AQ9UIY3 292 aa18.86■□□□□ 0.61
HOMER3-208ENST00000595756 LSM7Q9UK45 103 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms