RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ABHD11Q8NFV4 315 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 RP9Q8TA86 221 aaKnown RBP5.78□□□□□ -1.48
SMAD4-216ENST00000593223 ZNF668Q96K58 619 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-216ENST00000593223 ZC3H10Q96K80 434 aaKnown RBP5.78□□□□□ -1.48
SMAD4-216ENST00000593223 HIST1H2AAQ96QV6 131 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 COLEC11Q9BWP8 271 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 VN1R3Q9BXE9 311 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 MAGEB5Q9BZ81 275 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 DUSP22Q9NRW4 184 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 MYO1AQ9UBC5 1043 aa5.78□□□□□ -1.48
SMAD4-216ENST00000593223 NEO1Q92859 1461 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 WRNQ14191 1432 aaPredicted RBP eCLIP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 AP4M1O00189 453 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 CES2O00748 559 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 AREL1O15033 823 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 SH3BP5O60239 455 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 PPFIA2O75334 1257 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 HNRNPCP07910 306 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 HARSP12081 509 aaKnown RBP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 MYL4P12829 197 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 IDEP14735 1019 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 SOX10P56693 466 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 PMS2P11Q13670 270 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 AARS2Q5JTZ9 985 aaKnown RBP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 L1TD1Q5T7N2 865 aaKnown RBP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 Q6ZWC4 215 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 RD3Q7Z3Z2 195 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 FAM186BQ8IYM0 893 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 OR2C3Q8N628 320 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 SIRT6Q8N6T7 355 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 PMM1Q92871 262 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 TIMP4Q99727 224 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 ELAC2Q9BQ52 826 aaKnown RBP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 ZCWPW1Q9H0M4 648 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 CERS4Q9HA82 394 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 ALG13Q9NP73 1137 aaKnown RBP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 SEMA4GQ9NTN9 838 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 DNAJB11Q9UBS4 358 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 ADAMTS5Q9UNA0 930 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 WNT6Q9Y6F9 365 aa5.77□□□□□ -1.49
SMAD4-216ENST00000593223 COL11A2P13942 1736 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-216ENST00000593223 A0A1W2PPC4 97 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 CLCA1A8K7I4 914 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 IGLV2-14P01704 120 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 CTGFP29279 349 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 NTSR1P30989 418 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 TM4SF4P48230 202 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 ALDH5A1P51649 535 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-216ENST00000593223 TIRAPP58753 221 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 E2F1Q01094 437 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 BRD3Q15059 726 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 MANEALQ5VSG8 457 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 IZUMO3Q5VZ72 239 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 CEP85Q6P2H3 762 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 CRTC1Q6UUV9 634 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 NAPRTQ6XQN6 538 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 CATSPERGQ6ZRH7 1159 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 ADGRG3Q86Y34 549 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 DNAJC10Q8IXB1 793 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 VGLL2Q8N8G2 317 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 C11orf44Q8N8P7 122 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 PNISRQ8TF01 805 aaKnown RBP5.76□□□□□ -1.49
SMAD4-216ENST00000593223 TBC1D5Q92609 795 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 NELL1Q92832 810 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 ZNF566Q969W8 418 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 RSPRY1Q96DX4 576 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 CRAMP1Q96RY5 1269 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 MAF1Q9H063 256 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 SLC25A32Q9H2D1 315 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 AS3MTQ9HBK9 375 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 NLRC4Q9NPP4 1024 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 SH3BP4Q9P0V3 963 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 CAPN11Q9UMQ6 739 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 MAN2B2Q9Y2E5 1009 aa5.76□□□□□ -1.49
SMAD4-216ENST00000593223 DENND4BO75064 1496 aaPredicted RBP5.76□□□□□ -1.49
SMAD4-216ENST00000593223 TCOF1Q13428 1488 aaKnown RBP5.76□□□□□ -1.49
SMAD4-216ENST00000593223 C3P01024 1663 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 FHOD3Q2V2M9 1422 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 ZFYVE16Q7Z3T8 1539 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 DISP1Q96F81 1524 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 RICTORQ6R327 1708 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 EXOC5O00471 708 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 COQ9O75208 318 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 PMPCBO75439 489 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 PDE8BO95263 885 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 CD19P15391 556 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 WT1P19544 449 aaPredicted RBP5.75□□□□□ -1.49
SMAD4-216ENST00000593223 ATICP31939 592 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 GKP32189 559 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 C1QTNF8P60827 252 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 TIAL1Q01085 375 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMAD4-216ENST00000593223 GRM1Q13255 1194 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 C4orf46Q504U0 113 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 ZNF772Q68DY9 489 aaPredicted RBP5.75□□□□□ -1.49
SMAD4-216ENST00000593223 FBXO38Q6PIJ6 1188 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 CLEC9AQ6UXN8 241 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 KRT28Q7Z3Y7 464 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 ZNF384Q8TF68 577 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms