RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 RSPRY1Q96DX4 576 aa15.66■□□□□ 0.1
DDX39A-221ENST00000593026 SMPD4Q9NXE4 827 aa15.66■□□□□ 0.1
DDX39A-221ENST00000593026 NUDT5Q9UKK9 219 aa15.66■□□□□ 0.1
DDX39A-221ENST00000593026 CPQQ9Y646 472 aa15.66■□□□□ 0.1
DDX39A-221ENST00000593026 HELZP42694 1942 aaKnown RBP15.66■□□□□ 0.1
DDX39A-221ENST00000593026 TTC28Q96AY4 2481 aa15.66■□□□□ 0.1
DDX39A-221ENST00000593026 FAM170AA1A519 330 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 TBX18O95935 607 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 ERBB2P04626 1255 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 PSMC3P17980 439 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 TNFAIP3P21580 790 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 PRKCIP41743 596 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 USP4Q13107 963 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 KLHDC10Q6PID8 442 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 HFE2Q6ZVN8 426 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 TMC6Q7Z403 805 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 DDX42Q86XP3 938 aaKnown RBP eCLIP15.65■□□□□ 0.14e-6■□□□□ 8.2
DDX39A-221ENST00000593026 ZNF276Q8N554 614 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 SH3RF2Q8TEC5 729 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 RNF139Q8WU17 664 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 EDEM1Q92611 657 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 MRFAP1L1Q96HT8 127 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 PCDHB18PQ96TA0 734 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 TRIM62Q9BVG3 475 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 TRMT61BQ9BVS5 477 aaKnown RBP15.65■□□□□ 0.1
DDX39A-221ENST00000593026 C1QTNF1Q9BXJ1 281 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 HAUS4Q9H6D7 363 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 ABCC13Q9NSE7 274 aa15.65■□□□□ 0.1
DDX39A-221ENST00000593026 OLA1Q9NTK5 396 aaKnown RBP15.65■□□□□ 0.1
DDX39A-221ENST00000593026 THG1LQ9NWX6 298 aaKnown RBP15.65■□□□□ 0.1
DDX39A-221ENST00000593026 MYO10Q9HD67 2058 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 LEFTY2O00292 366 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 DCXO43602 365 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 NARSO43776 548 aaKnown RBP15.64■□□□□ 0.09
DDX39A-221ENST00000593026 SRFP11831 508 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 TCF3P15923 654 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 NSFP46459 744 aaKnown RBP15.64■□□□□ 0.09
DDX39A-221ENST00000593026 FCHO2Q0JRZ9 810 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 ZNF77Q15935 545 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 CLEC16AQ2KHT3 1053 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 TDRD12Q587J7 1177 aaKnown RBP15.64■□□□□ 0.09
DDX39A-221ENST00000593026 OR6B2Q6IFH4 312 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 TOGARAM2Q6ZUX3 1019 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 FAM183BPQ6ZVS7 135 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 UBALD2Q8IYN6 164 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 C18orf8Q96DM3 657 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 LRRC3BQ96PB8 259 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 SYT11Q9BT88 431 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 SMOC2Q9H3U7 446 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 DNMT3LQ9UJW3 386 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 STRIP2Q9ULQ0 834 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 DUSP12Q9UNI6 340 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 BZW2Q9Y6E2 419 aaKnown RBP15.64■□□□□ 0.09
DDX39A-221ENST00000593026 BDP1A6H8Y1 2624 aa15.64■□□□□ 0.09
DDX39A-221ENST00000593026 ZNF263O14978 683 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 MDM4O15151 490 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 MFAP3LO75121 409 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 SERPING1P05155 500 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 SKILP12757 684 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 UNGP13051 313 aaPredicted RBP15.63■□□□□ 0.09
DDX39A-221ENST00000593026 ALADP13716 330 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 GDI1P31150 447 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 GABRB2P47870 512 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 GPC5P78333 572 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 ZXDBP98169 803 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 CENPCQ03188 943 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 GOLGA8FQ08AF8 430 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 GOLGA8DPQ0D2H9 430 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 EFEMP1Q12805 493 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 MTF1Q14872 753 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 ARHGAP29Q52LW3 1261 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 EFHC1Q5JVL4 640 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 CC2D1AQ6P1N0 951 aaPredicted RBP15.63■□□□□ 0.09
DDX39A-221ENST00000593026 OLFML1Q6UWY5 402 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 MMS22LQ6ZRQ5 1243 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 ZNF571Q7Z3V5 609 aaPredicted RBP15.63■□□□□ 0.09
DDX39A-221ENST00000593026 MIB1Q86YT6 1006 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 ZDHHC17Q8IUH5 632 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 SLC30A5Q8TAD4 765 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 RIN3Q8TB24 985 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 KHSRPQ92945 711 aaKnown RBP eCLIP15.63■□□□□ 0.09
DDX39A-221ENST00000593026 PIWIL1Q96J94 861 aaKnown RBP15.63■□□□□ 0.09
DDX39A-221ENST00000593026 ZFRQ96KR1 1074 aaKnown RBP15.63■□□□□ 0.09
DDX39A-221ENST00000593026 C11orf70Q9BRQ4 267 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 BRD9Q9H8M2 597 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 CFAP97Q9P2B7 532 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 RASAL2Q9UJF2 1139 aa15.63■□□□□ 0.09
DDX39A-221ENST00000593026 CAPN9O14815 690 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 CHADO15335 359 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 GLI1P08151 1106 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 NCAM1P13591 858 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 MMP8P22894 467 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 HNRNPH3P31942 346 aaKnown RBP15.62■□□□□ 0.09
DDX39A-221ENST00000593026 YWHAZP63104 245 aaKnown RBP15.62■□□□□ 0.09
DDX39A-221ENST00000593026 ZXDAP98168 799 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 SLC6A3Q01959 620 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 TSR1Q2NL82 804 aaKnown RBP15.62■□□□□ 0.09
DDX39A-221ENST00000593026 C2CD6Q53TS8 623 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 HGSNATQ68CP4 663 aa15.62■□□□□ 0.09
DDX39A-221ENST00000593026 BEND5Q7L4P6 421 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms