RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 ZNF384Q8TF68 577 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PTPRN2Q92932 1015 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 POP5Q969H6 163 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 RNF34Q969K3 372 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 DENND2DQ9H6A0 471 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 TDRD3Q9H7E2 651 aaKnown RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 LRRC4CQ9HCJ2 640 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 TRPV5Q9NQA5 729 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 PTTG2Q9NZH5 202 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 SEPT10Q9P0V9 454 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 KLHL8Q9P2G9 620 aaPredicted RBP3.66□□□□□ -1.82
VMP1-216ENST00000592790 RAB26Q9ULW5 256 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 USP18Q9UMW8 372 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 DMTF1Q9Y222 760 aa3.66□□□□□ -1.82
VMP1-216ENST00000592790 NFASCO94856 1347 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 MYH1P12882 1939 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 TMEM191CA6NGB0 347 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 ERI2A8K979 691 aaKnown RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 C19orf81C9J6K1 198 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 KBTBD13C9JR72 458 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 OATP04181 439 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 NR3C2P08235 984 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 STMN1P16949 149 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 KDELR1P24390 212 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 GABRB2P47870 512 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 SLC1A6P48664 564 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 MGAT5Q09328 741 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 KCNA1Q09470 495 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 TBL3Q12788 808 aaKnown RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 PRKAA1Q13131 559 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 RNASEH2BQ5TBB1 312 aaKnown RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 FAM91A1Q658Y4 838 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 SCARA3Q6AZY7 606 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 C16orf87Q6PH81 154 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 C1orf228Q6PIY5 440 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 RHBDF2Q6PJF5 856 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 SCARA5Q6ZMJ2 495 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 RIPOR1Q6ZS17 1223 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 ZBTB33Q86T24 672 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 BRSK2Q8IWQ3 736 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 ULK2Q8IYT8 1036 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 DEPDC4Q8N2C3 294 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 PAF1Q8N7H5 531 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 KLHL23Q8NBE8 558 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 TMEM161BQ8NDZ6 487 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 MCUQ8NE86 351 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 ADCY4Q8NFM4 1077 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 BEST2Q8NFU1 509 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 CALML6Q8TD86 181 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 HELQQ8TDG4 1101 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 TFB1MQ8WVM0 346 aaKnown RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 CCDC124Q96CT7 223 aaKnown RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 THAP11Q96EK4 314 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 KREMEN1Q96MU8 473 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 ZNF570Q96NI8 536 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 PCDHB18PQ96TA0 734 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 FGFBP2Q9BYJ0 223 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 LHX5Q9H2C1 402 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 LRRC40Q9H9A6 602 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 ALG13Q9NP73 1137 aaKnown RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 TOPORSQ9NS56 1045 aaPredicted RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 PRMT7Q9NVM4 692 aaPredicted RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 KLHL11Q9NVR0 708 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 GID8Q9NWU2 228 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 DNAJC28Q9NX36 388 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 ADA2Q9NZK5 511 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 BTBD7Q9P203 1132 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 POLLQ9UGP5 575 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 UBIAD1Q9Y5Z9 338 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 SNCAIPQ9Y6H5 919 aa3.65□□□□□ -1.82
VMP1-216ENST00000592790 ASTN2O75129 1339 aaPredicted RBP3.65□□□□□ -1.82
VMP1-216ENST00000592790 IGLV3-22A0A075B6J6 115 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 FAM170AA1A519 330 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 PPP1R11O60927 126 aaPredicted RBP3.65□□□□□ -1.83
VMP1-216ENST00000592790 KRT36O76013 467 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 SRP72O76094 671 aaKnown RBP3.65□□□□□ -1.83
VMP1-216ENST00000592790 HMGCRP04035 888 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 LYNP07948 512 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 ZCCHC18P0CG32 403 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 CCDC166P0CW27 439 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 MLNP12872 115 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 CHRNB2P17787 502 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 PGAM1P18669 254 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 CRHR1P34998 444 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 ACOT2P49753 483 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 SLC26A2P50443 739 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 NAA20P61599 178 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 DPYSQ14117 519 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 CRY2Q49AN0 593 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 SLC44A4Q53GD3 710 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 FASTKD1Q53R41 847 aaKnown RBP3.65□□□□□ -1.83
VMP1-216ENST00000592790 TNFAIP8L3Q5GJ75 292 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 PPP6R3Q5H9R7 873 aaPredicted RBP3.65□□□□□ -1.83
VMP1-216ENST00000592790 SEL1L3Q68CR1 1132 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 AADACL2Q6P093 401 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 GPR141Q7Z602 305 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 FAM83AQ86UY5 434 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 SIX6OS1Q8N1H7 587 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 BANPQ8N9N5 519 aa3.65□□□□□ -1.83
VMP1-216ENST00000592790 MTMR14Q8NCE2 650 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms