RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 PRKCBP05771 671 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 GATA3P23771 443 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 RBL1P28749 1068 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 CDK7P50613 346 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 VAV2P52735 878 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 TLE2Q04725 743 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 CRHR2Q13324 411 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 CUL4BQ13620 913 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 GRM4Q14833 912 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 CLCA4Q14CN2 919 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 GEN1Q17RS7 908 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 RABL3Q5HYI8 236 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 RINT1Q6NUQ1 792 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 CASC1Q6TDU7 716 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 TTC30AQ86WT1 665 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 TMTC1Q8IUR5 882 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 SUN3Q8TAQ9 357 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 CPT1CQ8TCG5 803 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 TMEM171Q8WVE6 324 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 ZNF622Q969S3 477 aaKnown RBP eCLIP7.2□□□□□ -1.262e-7■■□□□ 12.7
VMP1-215ENST00000592619 FUBP1Q96AE4 644 aaKnown RBP7.2□□□□□ -1.26
VMP1-215ENST00000592619 TMEM125Q96AQ2 219 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 SKA1Q96BD8 255 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 TEPSINQ96N21 525 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 WWC2-AS2Q96NR7 200 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 TAF1DQ9H5J8 278 aaPredicted RBP7.2□□□□□ -1.26
VMP1-215ENST00000592619 FSCN3Q9NQT6 498 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 INTS13Q9NVM9 706 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 AURKAIP1Q9NWT8 199 aaPredicted RBP7.2□□□□□ -1.26
VMP1-215ENST00000592619 GGA3Q9NZ52 723 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 NFU1Q9UMS0 254 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 TMEM98Q9Y2Y6 226 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 NOX1Q9Y5S8 564 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 SNX14Q9Y5W7 946 aa7.2□□□□□ -1.26
VMP1-215ENST00000592619 KIF14Q15058 1648 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 TSPOAP1O95153 1857 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 MAGI3Q5TCQ9 1506 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 FAM90A18PA6NE21 464 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 FAM90A16PA6NEW6 464 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 TTC36A6NLP5 189 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 FAM90A9PA6NNJ1 464 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 FAM90A5PA8MXJ8 464 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 H0Y3Z8 333 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 AGPSO00116 658 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 HOXC11O43248 304 aaPredicted RBP7.19□□□□□ -1.26
VMP1-215ENST00000592619 CBFA2T3O75081 653 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 TAF5LO75529 589 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 TK1P04183 234 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 ITGB3P05106 788 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 FAM90A15PP0C7V4 464 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 FAM90A14PP0C7W9 464 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 KLRK1P26718 216 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 ADORA2AP29274 412 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 AARSP49588 968 aaKnown RBP eCLIP7.19□□□□□ -1.26
VMP1-215ENST00000592619 PRKAA2P54646 552 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 ACTR2P61160 394 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 ADAM17P78536 824 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 LMOD3Q0VAK6 560 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 CCDC96Q2M329 555 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 TTC22Q5TAA0 569 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 RETSATQ6NUM9 610 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 CPOQ8IVL8 374 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 OSCP1Q8WVF1 389 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 ZBTB45Q96K62 511 aaPredicted RBP7.19□□□□□ -1.26
VMP1-215ENST00000592619 TRAPPC9Q96Q05 1148 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 GPR20Q99678 358 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 TTPALQ9BTX7 342 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 VPS16Q9H269 839 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 UNC45AQ9H3U1 944 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 CD248Q9HCU0 757 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 AKIP1Q9NQ31 210 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 C19orf53Q9UNZ5 99 aaPredicted RBP7.19□□□□□ -1.26
VMP1-215ENST00000592619 USP22Q9UPT9 525 aa7.19□□□□□ -1.26
VMP1-215ENST00000592619 TROQ12816 1431 aaPredicted RBP7.18□□□□□ -1.26
VMP1-215ENST00000592619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.18□□□□□ -1.26
VMP1-215ENST00000592619 CFAP74Q9C0B2 1584 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 ZAR1LA6NP61 321 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 EFCAB8A8MWE9 144 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 POLBP06746 335 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 NTSR1P30989 418 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 HTR7P34969 479 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 TIRAPP58753 221 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 FAM189BP81408 668 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 POU5F1Q01860 360 aaKnown RBP7.18□□□□□ -1.26
VMP1-215ENST00000592619 TOB2Q14106 344 aaPredicted RBP7.18□□□□□ -1.26
VMP1-215ENST00000592619 CSHL1Q14406 222 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 BEAN1Q3B7T3 259 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 ANKS1BQ7Z6G8 1248 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 DTX2Q86UW9 622 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 IZUMO1Q8IYV9 350 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 AFG1LQ8WV93 481 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 ATRIPQ8WXE1 791 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 RNF31Q96EP0 1072 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 SEC62Q99442 399 aaKnown RBP7.18□□□□□ -1.26
VMP1-215ENST00000592619 C17orf80Q9BSJ5 609 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 VN1R3Q9BXE9 311 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 ALOXE3Q9BYJ1 711 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 ZHX3Q9H4I2 956 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 ZCCHC4Q9H5U6 513 aa7.18□□□□□ -1.26
VMP1-215ENST00000592619 UNKLQ9H9P5 680 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms