RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 OBSL1O75147 1896 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 GTPBP10A4D1E9 387 aaKnown RBP14.65□□□□□ -0.06
CLIP3-205ENST00000592017 XPO1O14980 1071 aaKnown RBP14.65□□□□□ -0.06
CLIP3-205ENST00000592017 HRO43593 1189 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 TLR5O60602 858 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 TPM2P07951 284 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 ZDHHC11BP0C7U3 371 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 SETSIPP0DME0 302 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 EEF1GP26641 437 aaKnown RBP14.65□□□□□ -0.06
CLIP3-205ENST00000592017 TUBP50607 506 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 NRLP54845 237 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 AMPD2Q01433 879 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 MYL5Q02045 173 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 PPP2R5DQ14738 602 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 GAB4Q2WGN9 574 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 SNX30Q5VWJ9 437 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 ENOSF1Q7L5Y1 443 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 FAM81BQ96LP2 452 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 P2RY13Q9BPV8 354 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 NMUR1Q9HB89 426 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 LRRC4Q9HBW1 653 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 FANCLQ9NW38 375 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 CFAP97Q9P2B7 532 aa14.65□□□□□ -0.06
CLIP3-205ENST00000592017 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLIP3-205ENST00000592017 SMG5Q9UPR3 1016 aaKnown RBP14.65□□□□□ -0.06
CLIP3-205ENST00000592017 MDM4O15151 490 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 TBX18O95935 607 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 DRD1P21728 446 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 RGS7P49802 495 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 TKTL1P51854 596 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 ZNF132P52740 706 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 ADIGQ0VDE8 80 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 SRSF5Q13243 272 aaKnown RBP14.64□□□□□ -0.07
CLIP3-205ENST00000592017 KRT31Q15323 416 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 STILQ15468 1287 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 ANO6Q4KMQ2 910 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 CDKAL1Q5VV42 579 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 HEATR6Q6AI08 1181 aaKnown RBP14.64□□□□□ -0.07
CLIP3-205ENST00000592017 LCLAT1Q6UWP7 414 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 CCDC186Q7Z3E2 898 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 DDX42Q86XP3 938 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLIP3-205ENST00000592017 ADGRG2Q8IZP9 1017 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 AOPEPQ8N6M6 819 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 KIAA1958Q8N8K9 716 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 SECISBP2LQ93073 1101 aaKnown RBP14.64□□□□□ -0.07
CLIP3-205ENST00000592017 ZFRQ96KR1 1074 aaKnown RBP14.64□□□□□ -0.07
CLIP3-205ENST00000592017 ZSWIM1Q9BR11 485 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 LSM14BQ9BX40 385 aaKnown RBP14.64□□□□□ -0.07
CLIP3-205ENST00000592017 ULBP1Q9BZM6 244 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 VPS16Q9H269 839 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 OSER1Q9NX31 292 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 AJAP1Q9UKB5 411 aaPredicted RBP14.64□□□□□ -0.07
CLIP3-205ENST00000592017 NUDT5Q9UKK9 219 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 SH3BP1Q9Y3L3 701 aa14.64□□□□□ -0.07
CLIP3-205ENST00000592017 GREB1Q4ZG55 1949 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 PIK3R2O00459 728 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 THAP12O43422 761 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 RNF40O75150 1001 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 LETM1O95202 739 aaPredicted RBP14.63□□□□□ -0.07
CLIP3-205ENST00000592017 NFATC1O95644 943 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 RALAP11233 206 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 RARGP13631 454 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 LCP1P13796 627 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 GNA15P30679 374 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 HOXA6P31267 233 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 PLA2G4AP47712 749 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 RAPGEF1Q13905 1077 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 CNGA2Q16280 664 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 C10orf120Q5SQS8 335 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 KIAA2013Q8IYS2 634 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 SIX6OS1Q8N1H7 587 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 ANKRD20A12PQ8NF67 263 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 CD101Q93033 1021 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 WBP2Q969T9 261 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 HINFPQ9BQA5 517 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 UBXN6Q9BZV1 441 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 SIX2Q9NPC8 291 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 ACP6Q9NPH0 428 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 DNAJC12Q9UKB3 198 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 USP3Q9Y6I4 520 aa14.63□□□□□ -0.07
CLIP3-205ENST00000592017 PATJQ8NI35 1801 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 DMXL1Q9Y485 3027 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 ANTXRLA6NF34 631 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 BECN2A8MW95 431 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 MED7O43513 233 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 ZBED1O96006 694 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 CYP17A1P05093 508 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 PNMA6AP0CW24 399 aaPredicted RBP14.62□□□□□ -0.07
CLIP3-205ENST00000592017 ATP5C1P36542 298 aaKnown RBP14.62□□□□□ -0.07
CLIP3-205ENST00000592017 OPRD1P41143 372 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 PXNP49023 591 aaPredicted RBP14.62□□□□□ -0.07
CLIP3-205ENST00000592017 YWHAGP61981 247 aaKnown RBP eCLIP14.62□□□□□ -0.07
CLIP3-205ENST00000592017 NR1H3Q13133 447 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 DHCR24Q15392 516 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 LPAL2Q16609 132 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 KLHL40Q2TBA0 621 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 RAB41Q5JT25 222 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 FKBP15Q5T1M5 1219 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 RHBDF2Q6PJF5 856 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 RSRC2Q7L4I2 434 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms