RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SLC6A11P48066 632 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 DLG4P78352 724 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 BIRC3Q13489 604 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 CCDC6Q16204 474 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 ZNF699Q32M78 642 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 IL31Q6EBC2 164 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 SV2AQ7L0J3 742 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 FAM35AQ86V20 835 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 UNC93AQ86WB7 457 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 ZMIZ2Q8NF64 920 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 TSTD1Q8NFU3 115 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 OLIG1Q8TAK6 271 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 FBXO32Q969P5 355 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 SMARCD1Q96GM5 515 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 LSM14BQ9BX40 385 aaKnown RBP11.02□□□□□ -0.65
VPS4B-207ENST00000591519 DMAP1Q9NPF5 467 aaPredicted RBP11.02□□□□□ -0.65
VPS4B-207ENST00000591519 PRDM9Q9NQV7 894 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 SMPD4Q9NXE4 827 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 TRAF3IP3Q9Y228 551 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 HPSEQ9Y251 543 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 FCF1Q9Y324 198 aaKnown RBP11.02□□□□□ -0.65
VPS4B-207ENST00000591519 ACACBO00763 2458 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 ATP8B3O60423 1300 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 FAM237AA0A1B0GTK4 181 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.01□□□□□ -0.65
VPS4B-207ENST00000591519 HOXC11O43248 304 aaPredicted RBP11.01□□□□□ -0.65
VPS4B-207ENST00000591519 CAVIN2O95810 425 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 ASS1P00966 412 aaKnown RBP11.01□□□□□ -0.65
VPS4B-207ENST00000591519 NR3C1P04150 777 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 APODP05090 189 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 ADH5P11766 374 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 P4HA1P13674 534 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 GRIA2P42262 883 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 SLC5A3P53794 718 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 GAD2Q05329 585 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 ENPEPQ07075 957 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 MESP2Q0VG99 397 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 NFIL3Q16649 462 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 LY6G5CQ5SRR4 150 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 C1orf220Q5T0J3 134 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 PMS2CLQ68D20 193 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 ACOT1Q86TX2 421 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 ETFBKMTQ8IXQ9 262 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 PHTF2Q8N3S3 785 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 CCDC33Q8N5R6 958 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 IL17RCQ8NAC3 791 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 SMOQ99835 787 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 GOLPH3LQ9H4A5 285 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 FBXO44Q9H4M3 255 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 EXOC1Q9NV70 894 aa11.01□□□□□ -0.65
VPS4B-207ENST00000591519 MYO18AQ92614 2054 aaKnown RBP11□□□□□ -0.65
VPS4B-207ENST00000591519 GOLGA6L4A6NEF3 574 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 GREM1O60565 184 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 AP1G2O75843 785 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 BEST1O76090 585 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 ALDH1A2O94788 518 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 HNRNPLP14866 589 aaKnown RBP eCLIP11□□□□□ -0.65
VPS4B-207ENST00000591519 SYKP43405 635 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 NDUFA8P51970 172 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 NDST1P52848 882 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 SEC13P55735 322 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 CREB5Q02930 508 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 INCA1Q0VD86 236 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 IFRD2Q12894 506 aaPredicted RBP11□□□□□ -0.65
VPS4B-207ENST00000591519 PREPLQ4J6C6 727 aaPredicted RBP11□□□□□ -0.65
VPS4B-207ENST00000591519 SPDYCQ5MJ68 293 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 EOGTQ5NDL2 527 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 EMC10Q5UCC4 262 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 HTR3DQ70Z44 454 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 C12orf40Q86WS4 652 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 SFTPA1Q8IWL2 248 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 ZNF276Q8N554 614 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 TXNDC5Q8NBS9 432 aaKnown RBP11□□□□□ -0.65
VPS4B-207ENST00000591519 MDGA1Q8NFP4 955 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 HNRNPABQ99729 332 aaKnown RBP11□□□□□ -0.65
VPS4B-207ENST00000591519 MED10Q9BTT4 135 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 CCSER2Q9H7U1 834 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 PNPLA8Q9NP80 782 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 CYLDQ9NQC7 956 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 ARHGEF4Q9NR80 690 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 GMIPQ9P107 970 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 FRMD4BQ9Y2L6 1034 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 STARD13Q9Y3M8 1113 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 NUP205Q92621 2012 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 EPG5Q9HCE0 2579 aa11□□□□□ -0.65
VPS4B-207ENST00000591519 THADAQ6YHU6 1953 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 HHLA1C9JL84 531 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 SGK1O00141 431 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 CALUO43852 315 aaPredicted RBP10.99□□□□□ -0.65
VPS4B-207ENST00000591519 TLR5O60602 858 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 ADAM23O75077 832 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 TULP3O75386 442 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 RHOBTB3O94955 611 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 KIF20AO95235 890 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 KLF8O95600 359 aaPredicted RBP10.99□□□□□ -0.65
VPS4B-207ENST00000591519 PMLP29590 882 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 GBP1P32455 592 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 P2RY2P41231 377 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 ASPAP45381 313 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 PGFP49763 221 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms