RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 USP3Q9Y6I4 520 aa16.75■□□□□ 0.27
NFIX-213ENST00000591028 KANSL1LA0AUZ9 987 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 LMNAP02545 664 aaKnown RBP16.74■□□□□ 0.27
NFIX-213ENST00000591028 RALAP11233 206 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 FECHP22830 423 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 NSFP46459 744 aaKnown RBP16.74■□□□□ 0.27
NFIX-213ENST00000591028 GPR15P49685 360 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 CACNA2D1P54289 1103 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 CCDC173Q0VFZ6 552 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 SLC44A4Q53GD3 710 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 PRSS36Q5K4E3 855 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 SNX30Q5VWJ9 437 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 MAML2Q8IZL2 1156 aaPredicted RBP16.74■□□□□ 0.27
NFIX-213ENST00000591028 ZNF276Q8N554 614 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 UBA3Q8TBC4 463 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 CPLX3Q8WVH0 158 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 DDX1Q92499 740 aaKnown RBP16.74■□□□□ 0.27
NFIX-213ENST00000591028 TCEAL4Q96EI5 215 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 SHDQ96IW2 340 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 PPP1R9BQ96SB3 815 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 ZSWIM1Q9BR11 485 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 LRRC3Q9BY71 257 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 PLA2G2FQ9BZM2 168 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 TASP1Q9H6P5 420 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 KIF9Q9HAQ2 790 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 OLA1Q9NTK5 396 aaKnown RBP16.74■□□□□ 0.27
NFIX-213ENST00000591028 CLIC5Q9NZA1 410 aa16.74■□□□□ 0.27
NFIX-213ENST00000591028 PTPRDP23468 1912 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 A0A1W2PRU2 124 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 HHLA1C9JL84 531 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 BEST1O76090 585 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 GLI1P08151 1106 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 TNFAIP3P21580 790 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 SCNN1AP37088 669 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 AVPR1AP37288 418 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 RPL34P49207 117 aaKnown RBP16.73■□□□□ 0.27
NFIX-213ENST00000591028 CDK17Q00537 523 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 ADIGQ0VDE8 80 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 TAF10Q12962 218 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 SDHAF4Q5VUM1 108 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 TAF3Q5VWG9 929 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 PM20D1Q6GTS8 502 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 DENND1BQ6P3S1 775 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 TPRG1Q6ZUI0 275 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 IRF2BP2Q7Z5L9 587 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 TMEM110Q86TL2 294 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 DDX42Q86XP3 938 aaKnown RBP eCLIP16.73■□□□□ 0.27
NFIX-213ENST00000591028 TC2NQ8N9U0 490 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 TRIM11Q96F44 468 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 PPP1R13BQ96KQ4 1090 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 PANX2Q96RD6 677 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 AGPAT1Q99943 283 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 DDX23Q9BUQ8 820 aaKnown RBP16.73■□□□□ 0.27
NFIX-213ENST00000591028 SLC4A5Q9BY07 1137 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 TMEM30AQ9NV96 361 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 SEPT11Q9NVA2 429 aaKnown RBP16.73■□□□□ 0.27
NFIX-213ENST00000591028 WDR35Q9P2L0 1181 aa16.73■□□□□ 0.27
NFIX-213ENST00000591028 TRAV19A0A0A6YYK7 116 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 SSU72P8A0A1W2PR75 194 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 NRDCO43847 1150 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 F11P03951 625 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 CALB1P05937 261 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 GZMAP12544 262 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 TARSP26639 723 aaKnown RBP16.72■□□□□ 0.27
NFIX-213ENST00000591028 CCR2P41597 374 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 ID4P47928 161 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 PRKCQQ04759 706 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 GOLGA8FQ08AF8 430 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 GOLGA8DPQ0D2H9 430 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 IFRD2Q12894 506 aaPredicted RBP16.72■□□□□ 0.27
NFIX-213ENST00000591028 TANGO2Q6ICL3 276 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 PMF1Q6P1K2 205 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 KLHDC10Q6PID8 442 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 GAREM2Q75VX8 874 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 BEND5Q7L4P6 421 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 ERICH1Q86X53 443 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 KIAA1958Q8N8K9 716 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 SHKBP1Q8TBC3 707 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 HINFPQ9BQA5 517 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 NACA2Q9H009 215 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 DEF6Q9H4E7 631 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 IL21Q9HBE4 155 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 ZNF334Q9HCZ1 680 aaPredicted RBP16.72■□□□□ 0.27
NFIX-213ENST00000591028 LTB4R2Q9NPC1 389 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 ACP6Q9NPH0 428 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 ABHD10Q9NUJ1 306 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 SPATA6Q9NWH7 488 aaPredicted RBP16.72■□□□□ 0.27
NFIX-213ENST00000591028 ASNSD1Q9NWL6 643 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 F5P12259 2224 aa16.72■□□□□ 0.27
NFIX-213ENST00000591028 ZNF840PA6NDX5 716 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 FAM170BA6NMN3 283 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 CYP1A1P04798 512 aaPredicted RBP16.71■□□□□ 0.27
NFIX-213ENST00000591028 MMEP08473 750 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 USP17L7P0C7H9 530 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 DESP17661 470 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 FCARP24071 287 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 CDR1P51861 262 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 NOMO3P69849 1222 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 FMO1Q01740 532 aa16.71■□□□□ 0.27
NFIX-213ENST00000591028 PFKPQ01813 784 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms