RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 MBL2P11226 248 aaPredicted RBP6.89□□□□□ -1.31
DNMT1-222ENST00000590619 ABCB4P21439 1286 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 ACP1P24666 158 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 ACAT1P24752 427 aaKnown RBP6.89□□□□□ -1.31
DNMT1-222ENST00000590619 CD27P26842 260 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 RPA1P27694 616 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 COPAP53621 1224 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 EVCP57679 992 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 FOXK1P85037 733 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 TSPY1Q01534 308 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 PPP2R3AQ06190 1150 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 ORC1Q13415 861 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 CDCP2Q5VXM1 449 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 BBS7Q8IWZ6 715 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 SCFD1Q8WVM8 642 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 PRCCQ92733 491 aaPredicted RBP6.89□□□□□ -1.31
DNMT1-222ENST00000590619 EXTL1Q92935 676 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 FAM212AQ96EL1 285 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 SPATA17Q96L03 361 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 SLC46A1Q96NT5 459 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 MMS19Q96T76 1030 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 AGXT2Q9BYV1 514 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 CCSER1Q9C0I3 900 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 TMEM60Q9H2L4 133 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 BHMT2Q9H2M3 363 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 POLR1BQ9H9Y6 1135 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 DNAJC17Q9NVM6 304 aaKnown RBP6.89□□□□□ -1.31
DNMT1-222ENST00000590619 PLEKHB1Q9UF11 243 aaPredicted RBP6.89□□□□□ -1.31
DNMT1-222ENST00000590619 NBASA2RRP1 2371 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 A0A1W2PNU3 283 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 HCRTO43612 131 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 FAM189A1O60320 539 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 HIP1RO75146 1068 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ACADMP11310 421 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 SFTPCP11686 197 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ACO1P21399 889 aaKnown RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 MATR3P43243 847 aaKnown RBP eCLIP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 PPP3CCP48454 512 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 TAF6P49848 677 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ZNF132P52740 706 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 INHBCP55103 352 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 C21orf59P57076 290 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 STRN3Q13033 797 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 MAPK7Q13164 816 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 CLN3Q13286 438 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ENPP2Q13822 863 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 KRT32Q14532 448 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 CFAP221Q4G0U5 840 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 INTS6LQ5JSJ4 861 aaKnown RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 SCARA3Q6AZY7 606 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 FAM171BQ6P995 826 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ZPBP2Q6X784 338 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 KANSL1Q7Z3B3 1105 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ADAT2Q7Z6V5 191 aaKnown RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 DDX42Q86XP3 938 aaKnown RBP eCLIP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 SPATA2LQ8IUW3 424 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 CD302Q8IX05 232 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 PDCL2Q8N4E4 241 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 TMEM161BQ8NDZ6 487 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 PRR11Q96HE9 360 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ARHGAP9Q9BRR9 750 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 TTLL2Q9BWV7 592 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 THSD1Q9NS62 852 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 DDX43Q9NXZ2 648 aaKnown RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 THAP10Q9P2Z0 257 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-222ENST00000590619 FBXO10Q9UK96 956 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 NUMA1Q14980 2115 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 CITO14578 2027 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 ANAPC1Q9H1A4 1944 aa6.88□□□□□ -1.31
DNMT1-222ENST00000590619 OBSL1O75147 1896 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 ITPR2Q14571 2701 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 NEDD8-MDP1E9PL57 170 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 WNT9AO14904 365 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 COCHO43405 550 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 CACNG3O60359 315 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 GREM1O60565 184 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 DTNBO60941 627 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 ATP2C2O75185 946 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 FSBPO95073 299 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 MAPTP10636 758 aaKnown RBP6.87□□□□□ -1.31
DNMT1-222ENST00000590619 TYRP14679 529 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 CDC25AP30304 524 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 MAGEA11P43364 429 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 FOSBP53539 338 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 RACK1P63244 317 aaKnown RBP6.87□□□□□ -1.31
DNMT1-222ENST00000590619 TAF10Q12962 218 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 NR5A1Q13285 461 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 STARD3Q14849 445 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 SKIDA1Q1XH10 827 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 PROX2Q3B8N5 592 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 ZSCAN23Q3MJ62 389 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 SGO2Q562F6 1265 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 DENND5BQ6ZUT9 1274 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 OSTM1Q86WC4 334 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 TNFRSF25Q93038 417 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 P2RY11Q96G91 374 aa6.87□□□□□ -1.31
DNMT1-222ENST00000590619 FUBP3Q96I24 572 aaKnown RBP eCLIP6.87□□□□□ -1.31
DNMT1-222ENST00000590619 PHF12Q96QT6 1004 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms