RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 ZMYM5Q9UJ78 669 aa13.48□□□□□ -0.25
DDX39A-213ENST00000590315 STRIP2Q9ULQ0 834 aa13.48□□□□□ -0.25
DDX39A-213ENST00000590315 C5orf42Q9H799 3197 aa13.48□□□□□ -0.25
DDX39A-213ENST00000590315 PRUNE2Q8WUY3 3088 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 COCHO43405 550 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 OAS1P00973 400 aaKnown RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 PTMAP06454 111 aaKnown RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 HMBSP08397 361 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 UNGP13051 313 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 ABCB4P21439 1286 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 ATP5C1P36542 298 aaKnown RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 SLC6A3Q01959 620 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 ZP2Q05996 745 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 FAM78AQ5JUQ0 283 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 CCDC122Q5T0U0 273 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 DNAJC24Q6P3W2 148 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 WDR59Q6PJI9 974 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 XYLT1Q86Y38 959 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 DNAAF5Q86Y56 855 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 ZDHHC17Q8IUH5 632 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 ARID3BQ8IVW6 561 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 SMARCD2Q92925 531 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 ZNF653Q96CK0 615 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 PIWIL1Q96J94 861 aaKnown RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 SLC22A12Q96S37 553 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 CHP1Q99653 195 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 SELENOOQ9BVL4 669 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 NHEJ1Q9H9Q4 299 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 ZFP14Q9HCL3 533 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 OLA1Q9NTK5 396 aaKnown RBP13.47□□□□□ -0.25
DDX39A-213ENST00000590315 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.47□□□□□ -0.257e-9■□□□□ 9.8
DDX39A-213ENST00000590315 OSER1Q9NX31 292 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 CLIC5Q9NZA1 410 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 MYO1AQ9UBC5 1043 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 CPQQ9Y646 472 aa13.47□□□□□ -0.25
DDX39A-213ENST00000590315 MYOFQ9NZM1 2061 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 SYNJ2BP-COX16A0A087WUM0 186 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 A0A087X0T9 212 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-213ENST00000590315 HSF2BPO75031 334 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 RTN2O75298 545 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 PRAMEF12O95522 483 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 TBX18O95935 607 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 FTLP02792 175 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-213ENST00000590315 ASGR2P07307 311 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 ZDHHC11BP0C7U3 371 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 FAM228BP0C875 321 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 BMP1P13497 986 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 MMP8P22894 467 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.25
DDX39A-213ENST00000590315 VIPR2P41587 438 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 RPL34P49207 117 aaKnown RBP13.46□□□□□ -0.25
DDX39A-213ENST00000590315 TUBP50607 506 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 GSDMDP57764 484 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 GFPT1Q06210 699 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-213ENST00000590315 DCAF6Q58WW2 860 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 PARM1Q6UWI2 310 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 OLFML1Q6UWY5 402 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-213ENST00000590315 SCML4Q8N228 414 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 ADAMTS19Q8TE59 1207 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 TRIM11Q96F44 468 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 ASB16Q96NS5 453 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 NECAB3Q96P71 396 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-213ENST00000590315 PANX2Q96RD6 677 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 SYT11Q9BT88 431 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 FAM204AQ9H8W3 233 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 POPDC2Q9HBU9 364 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 SPTLC3Q9NUV7 552 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 TDP1Q9NUW8 608 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 COX16Q9P0S2 106 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 WDR35Q9P2L0 1181 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 DNMT3LQ9UJW3 386 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 SH3BP1Q9Y3L3 701 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 NUMBLQ9Y6R0 609 aa13.46□□□□□ -0.25
DDX39A-213ENST00000590315 COL6A3P12111 3177 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 SSU72P8A0A1W2PR75 194 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 SLC12A8A0AV02 714 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 ANKRD62A6NC57 917 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 HEPACAM2A8MVW5 462 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 SCAMP3O14828 347 aaKnown RBP13.45□□□□□ -0.26
DDX39A-213ENST00000590315 DAB1O75553 588 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 IPO7O95373 1038 aaKnown RBP13.45□□□□□ -0.26
DDX39A-213ENST00000590315 GJB6O95452 261 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 PFKLP17858 780 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 CYLC1P35663 651 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-213ENST00000590315 GABRB2P47870 512 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 YWHAZP63104 245 aaKnown RBP13.45□□□□□ -0.26
DDX39A-213ENST00000590315 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
DDX39A-213ENST00000590315 GRM2Q14416 872 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 ZNF268Q14587 947 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-213ENST00000590315 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 TAF5Q15542 800 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 SNX30Q5VWJ9 437 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 TANGO2Q6ICL3 276 aa13.45□□□□□ -0.26
DDX39A-213ENST00000590315 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms