RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SEMA4AQ9H3S1 761 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 ZSCAN32Q9NX65 697 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 CLIC5Q9NZA1 410 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 LSM7Q9UK45 103 aaKnown RBP12.7□□□□□ -0.38
TPM4-212ENST00000590180 FAM186AA6NE01 2351 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 M0QYV0 167 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 PES1O00541 588 aaKnown RBP12.69□□□□□ -0.38
TPM4-212ENST00000590180 ATG13O75143 517 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 RNF40O75150 1001 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 LMNAP02545 664 aaKnown RBP12.69□□□□□ -0.38
TPM4-212ENST00000590180 CYP17A1P05093 508 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 HMBSP08397 361 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 SETSIPP0DME0 302 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 NRLP54845 237 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 YWHAGP61981 247 aaKnown RBP eCLIP12.69□□□□□ -0.38
TPM4-212ENST00000590180 GAD2Q05329 585 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 EFEMP1Q12805 493 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 STILQ15468 1287 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 MAN2A1Q16706 1144 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 EXOC3L4Q17RC7 722 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 ANO4Q32M45 955 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 FBXO43Q4G163 708 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
TPM4-212ENST00000590180 RAB41Q5JT25 222 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 LY6G5CQ5SRR4 150 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 GJB7Q6PEY0 223 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 KLHDC10Q6PID8 442 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 HTR3DQ70Z44 454 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 SIX6OS1Q8N1H7 587 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 SECISBP2LQ93073 1101 aaKnown RBP12.69□□□□□ -0.38
TPM4-212ENST00000590180 OTUB2Q96DC9 234 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 FAM81BQ96LP2 452 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 CDK5RAP1Q96SZ6 601 aaKnown RBP12.69□□□□□ -0.38
TPM4-212ENST00000590180 ZSWIM1Q9BR11 485 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 FAM126AQ9BYI3 521 aaPredicted RBP12.69□□□□□ -0.38
TPM4-212ENST00000590180 PRMT8Q9NR22 394 aaPredicted RBP12.69□□□□□ -0.38
TPM4-212ENST00000590180 RASAL2Q9UJF2 1139 aa12.69□□□□□ -0.38
TPM4-212ENST00000590180 KIF26AQ9ULI4 1882 aaPredicted RBP12.68□□□□□ -0.38
TPM4-212ENST00000590180 PRR23AA6NEV1 266 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 KCNJ18B7U540 433 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 PIK3R2O00459 728 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 ADH5P11766 374 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 OPRD1P41143 372 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 COG7P83436 770 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 APBA1Q02410 837 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 ADIGQ0VDE8 80 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 KCNJ12Q14500 433 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 VWA3BQ502W6 1294 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 HEATR6Q6AI08 1181 aaKnown RBP12.68□□□□□ -0.38
TPM4-212ENST00000590180 PM20D1Q6GTS8 502 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 PMF1Q6P1K2 205 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 PKN3Q6P5Z2 889 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 TRIM65Q6PJ69 517 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 ENOSF1Q7L5Y1 443 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 TMEM25Q86YD3 366 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 ZNF276Q8N554 614 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 NAT16Q8N8M0 369 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 RNF139Q8WU17 664 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 KCTD13Q8WZ19 329 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 PNKPQ96T60 521 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 TUBGCP2Q9BSJ2 902 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 NDST4Q9H3R1 872 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
TPM4-212ENST00000590180 C2orf42Q9NWW7 574 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 STRIP2Q9ULQ0 834 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.68□□□□□ -0.38
TPM4-212ENST00000590180 SLC8A2Q9UPR5 921 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 PCDHGA2Q9Y5H1 932 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 MYOFQ9NZM1 2061 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 COL4A2P08572 1712 aa12.68□□□□□ -0.38
TPM4-212ENST00000590180 SLC12A8A0AV02 714 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 GTPBP10A4D1E9 387 aaKnown RBP12.67□□□□□ -0.38
TPM4-212ENST00000590180 CHURC1-FNTBB4DL54 471 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 THAP12O43422 761 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 MED7O43513 233 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 LETM1O95202 739 aaPredicted RBP12.67□□□□□ -0.38
TPM4-212ENST00000590180 APODP05090 189 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 PON1P27169 355 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 FNTBP49356 437 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 SEC13P55735 322 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 PKDCCQ504Y2 493 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 C2orf27AQ580R0 203 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 BSPRYQ5W0U4 402 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 TPGS1Q6ZTW0 290 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 ZBTB44Q8NCP5 570 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 RPLP0P6Q8NHW5 317 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 ENOX1Q8TC92 643 aaKnown RBP12.67□□□□□ -0.38
TPM4-212ENST00000590180 SLC35F5Q8WV83 523 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 EDEM1Q92611 657 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 CNGB3Q9NQW8 809 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 ARHGEF4Q9NR80 690 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 SPHK2Q9NRA0 654 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 POLR3BQ9NW08 1133 aaPredicted RBP12.67□□□□□ -0.38
TPM4-212ENST00000590180 MARCH2Q9P0N8 246 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 APEX2Q9UBZ4 518 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 CNTN6Q9UQ52 1028 aa12.67□□□□□ -0.38
TPM4-212ENST00000590180 NFE2L3Q9Y4A8 694 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms