RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 RCOR2Q8IZ40 523 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 RBM41Q96IZ5 413 aaKnown RBP18.21■□□□□ 0.51
CXXC1-212ENST00000589940 PEBP4Q96S96 227 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 ALG13Q9NP73 1137 aaKnown RBP18.21■□□□□ 0.51
CXXC1-212ENST00000589940 KLHL11Q9NVR0 708 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 COMMD8Q9NX08 183 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 CHD7Q9P2D1 2997 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 CTIFO43310 598 aaKnown RBP18.21■□□□□ 0.5
CXXC1-212ENST00000589940 ARHGEF15O94989 841 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 SEC24AO95486 1093 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 KRT1P04264 644 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 SMC1AQ14683 1233 aaKnown RBP18.21■□□□□ 0.5
CXXC1-212ENST00000589940 LONRF2Q1L5Z9 754 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 SMTNL2Q2TAL5 461 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 KCNT1Q5JUK3 1230 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 OTUD1Q5VV17 481 aaPredicted RBP18.21■□□□□ 0.5
CXXC1-212ENST00000589940 CYP4V2Q6ZWL3 525 aaPredicted RBP18.21■□□□□ 0.5
CXXC1-212ENST00000589940 MON1AQ86VX9 555 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 EDEM1Q92611 657 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 CYP4F11Q9HBI6 524 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 MAFFQ9ULX9 164 aa18.21■□□□□ 0.5
CXXC1-212ENST00000589940 COL4A4P53420 1690 aaPredicted RBP18.2■□□□□ 0.5
CXXC1-212ENST00000589940 PLXNA4Q9HCM2 1894 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.2■□□□□ 0.5
CXXC1-212ENST00000589940 ENDOD1O94919 500 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 CXCL14O95715 111 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 CA3P07451 260 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 CNPP09543 421 aaKnown RBP18.2■□□□□ 0.5
CXXC1-212ENST00000589940 YWHAQP27348 245 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 CA8P35219 290 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 UBE3AQ05086 875 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 BOLA3Q53S33 107 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 ODF2Q5BJF6 829 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 SCYL2Q6P3W7 929 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 CCDC50Q8IVM0 306 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 TNS4Q8IZW8 715 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 SPPL3Q8TCT6 385 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 ACSF2Q96CM8 615 aaPredicted RBP18.2■□□□□ 0.5
CXXC1-212ENST00000589940 TCF25Q9BQ70 676 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 ABCC13Q9NSE7 274 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 CALCOCO1Q9P1Z2 691 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 IRAK3Q9Y616 596 aa18.2■□□□□ 0.5
CXXC1-212ENST00000589940 M0QYT0 321 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 RB1P06400 928 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 RARAP10276 462 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 PITX1P78337 314 aaPredicted RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 BTBD8Q5XKL5 378 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 RSRC2Q7L4I2 434 aaKnown RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 SCD5Q86SK9 330 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 SLC13A5Q86YT5 568 aaPredicted RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 ARHGAP18Q8N392 663 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 RAPGEF5Q92565 580 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 SLITRK1Q96PX8 696 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 UBE2OQ9C0C9 1292 aaKnown RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 ENTPD7Q9NQZ7 604 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 PCDHA11Q9Y5I1 949 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 SLC38A8A6NNN8 435 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 RDXP35241 583 aaKnown RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 CETN2P41208 172 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 ATXN1P54253 815 aaKnown RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 ERVFC1P60507 584 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 COPS2P61201 443 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 TUBB4BP68371 445 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 C2orf54Q08AI8 447 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 SPRED2Q7Z698 418 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 TCEAL8Q8IYN2 117 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 NOA1Q8NC60 698 aaKnown RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 CMASQ8NFW8 434 aaPredicted RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 SLC7A14Q8TBB6 771 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 GIPC2Q8TF65 315 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 POF1BQ8WVV4 589 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 TEKT4Q8WW24 435 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 RNF25Q96BH1 459 aaPredicted RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 PGAP3Q96FM1 320 aaPredicted RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 NMUR1Q9HB89 426 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 RBM12Q9NTZ6 932 aaKnown RBP18.19■□□□□ 0.5
CXXC1-212ENST00000589940 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 YIPF1Q9Y548 306 aa18.19■□□□□ 0.5
CXXC1-212ENST00000589940 A0A1W2PQH9 124 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 LRRD1A4D1F6 860 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 PI4K2BG5E9Z4 385 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 KRIT1O00522 736 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 ELF1P32519 619 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 PGFP49763 221 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 MTMR3Q13615 1198 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 HSPH1Q92598 858 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 FBXO32Q969P5 355 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 GDF15Q99988 308 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 TTLL2Q9BWV7 592 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 TLR9Q9NR96 1032 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 GMIPQ9P107 970 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 UQCRHLA0A096LP55 91 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 PRRG1O14668 218 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 MDM4O15151 490 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 ADH1AP07327 375 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 UQCRHP07919 91 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 DNAJB1P25685 340 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 ALDH1A3P47895 512 aa18.18■□□□□ 0.5
CXXC1-212ENST00000589940 DEUP1Q05D60 604 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms