RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ZNF233A6NK53 670 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 KCNJ18B7U540 433 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 GREM1O60565 184 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 BEST1O76090 585 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 ATXN1LP0C7T5 689 aaKnown RBP16■□□□□ 0.15
SF3A2-204ENST00000589118 DLATP10515 647 aaKnown RBP16■□□□□ 0.15
SF3A2-204ENST00000589118 MYL6P60660 151 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 CEBPZQ03701 1054 aaKnown RBP16■□□□□ 0.15
SF3A2-204ENST00000589118 ORC1Q13415 861 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 WDR72Q3MJ13 1102 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 TRMT11Q7Z4G4 463 aaKnown RBP16■□□□□ 0.15
SF3A2-204ENST00000589118 DDX42Q86XP3 938 aaKnown RBP eCLIP16■□□□□ 0.15
SF3A2-204ENST00000589118 CCDC127Q96BQ5 260 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 CEP295NLQ96MC4 621 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 GPR174Q9BXC1 333 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 BBS2Q9BXC9 721 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 PRDM16Q9HAZ2 1276 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 HSPBP1Q9NZL4 362 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 EHD2Q9NZN4 543 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 FBXO2Q9UK22 296 aaPredicted RBP16■□□□□ 0.15
SF3A2-204ENST00000589118 NUDT5Q9UKK9 219 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 PCOLCE2Q9UKZ9 415 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 STARD13Q9Y3M8 1113 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 KIF3AQ9Y496 699 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 SLCO1B1Q9Y6L6 691 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 SHROOM3Q8TF72 1996 aa16■□□□□ 0.15
SF3A2-204ENST00000589118 ACACAQ13085 2346 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 MDM4O15151 490 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 ZNF217O75362 1048 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 TYRP14679 529 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 CYP4F3Q08477 520 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 SLC14A1Q13336 389 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 HNRNPDQ14103 355 aaKnown RBP15.99■□□□□ 0.15
SF3A2-204ENST00000589118 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
SF3A2-204ENST00000589118 SDE2Q6IQ49 451 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 CACUL1Q86Y37 369 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 KIAA1958Q8N8K9 716 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 B3GALNT2Q8NCR0 500 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 TOE1Q96GM8 510 aaKnown RBP15.99■□□□□ 0.15
SF3A2-204ENST00000589118 GABRG3Q99928 467 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 MED10Q9BTT4 135 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 ELOVL4Q9GZR5 314 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 GAREM1Q9H706 876 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 OLFML3Q9NRN5 406 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 TOR4AQ9NXH8 423 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 STK17AQ9UEE5 414 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 CCDC39Q9UFE4 941 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 BTBD3Q9Y2F9 522 aa15.99■□□□□ 0.15
SF3A2-204ENST00000589118 URB1O60287 2271 aaKnown RBP15.98■□□□□ 0.15
SF3A2-204ENST00000589118 KCNK3O14649 394 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 CLIC2O15247 247 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 TACC1O75410 805 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 CISD3P0C7P0 127 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 TNNI1P19237 187 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 SLC5A3P53794 718 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 CCDC157Q569K6 752 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 RABEPKQ7Z6M1 372 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 FAM35AQ86V20 835 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 WDR49Q8IV35 697 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 ZMIZ2Q8NF64 920 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 KCNV2Q8TDN2 545 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 SCFD1Q8WVM8 642 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 OTUB2Q96DC9 234 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 KLF16Q9BXK1 252 aaPredicted RBP15.98■□□□□ 0.15
SF3A2-204ENST00000589118 NACA2Q9H009 215 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 GZF1Q9H116 711 aaPredicted RBP15.98■□□□□ 0.15
SF3A2-204ENST00000589118 SDCBP2Q9H190 292 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 SMYD3Q9H7B4 428 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 OSER1Q9NX31 292 aa15.98■□□□□ 0.15
SF3A2-204ENST00000589118 APOBEC2Q9Y235 224 aaKnown RBP15.98■□□□□ 0.15
SF3A2-204ENST00000589118 FNDC3AQ9Y2H6 1198 aaKnown RBP15.98■□□□□ 0.15
SF3A2-204ENST00000589118 GOLGA4Q13439 2230 aaKnown RBP15.98■□□□□ 0.15
SF3A2-204ENST00000589118 FRMD3A2A2Y4 597 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 TRABD2BA6NFA1 517 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 MEI4A8MW99 385 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 ZBTB24O43167 697 aaPredicted RBP15.97■□□□□ 0.15
SF3A2-204ENST00000589118 RTN3O95197 1032 aaPredicted RBP15.97■□□□□ 0.15
SF3A2-204ENST00000589118 ZDHHC11BP0C7U3 371 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 NCAM1P13591 858 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 CD6P30203 668 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 CASP4P49662 377 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 TNNC1P63316 161 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 FUT11Q495W5 492 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 SYCP2LQ5T4T6 812 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 DCAF12L1Q5VU92 463 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 SCARA5Q6ZMJ2 495 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 PDILTQ8N807 584 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 SMOQ99835 787 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 MKRN2Q9H000 416 aaKnown RBP15.97■□□□□ 0.15
SF3A2-204ENST00000589118 FAM124BQ9H5Z6 455 aaPredicted RBP15.97■□□□□ 0.15
SF3A2-204ENST00000589118 WSB2Q9NYS7 404 aaPredicted RBP15.97■□□□□ 0.15
SF3A2-204ENST00000589118 SMC3Q9UQE7 1217 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 STON1Q9Y6Q2 735 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 NUMA1Q14980 2115 aa15.97■□□□□ 0.15
SF3A2-204ENST00000589118 ASXL3Q9C0F0 2248 aa15.96■□□□□ 0.15
SF3A2-204ENST00000589118 CACNG3O60359 315 aa15.96■□□□□ 0.15
SF3A2-204ENST00000589118 TLR5O60602 858 aa15.96■□□□□ 0.15
SF3A2-204ENST00000589118 CILPO75339 1184 aa15.96■□□□□ 0.15
SF3A2-204ENST00000589118 CCDC130P13994 396 aa15.96■□□□□ 0.15
SF3A2-204ENST00000589118 GNSP15586 552 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms