RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 HESX1Q9UBX0 185 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 PCSK1NQ9UHG2 260 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 HCN4Q9Y3Q4 1203 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 A0A087WZ62 844 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 IQANK1A0A1B0GTG1 560 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 ADM5C9JUS6 153 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 TM9SF1O15321 606 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 DCTN3O75935 186 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 OAS1P00973 400 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 LGALS2P05162 132 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 SETSIPP0DME0 302 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 ETS1P14921 441 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 EZRP15311 586 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 IRS1P35568 1242 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 SKIV2L2P42285 1042 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 GPD2P43304 727 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 RAP1GAPP47736 663 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 YARSP54577 528 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 CDH6P55285 790 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 BASP1P80723 227 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 CCDC15Q0P6D6 951 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 INCA1Q0VD86 236 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 KRT81Q14533 505 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 R3HDM1Q15032 1099 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 PCBP1Q15365 356 aaKnown RBP eCLIP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 DCAF4L1Q3SXM0 396 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 FAM133BQ5BKY9 247 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 LGSNQ5TDP6 509 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 FYB2Q5VWT5 728 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 TXNRD3NBQ6F5E7 133 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 OR6B2Q6IFH4 312 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 RGS9BPQ6ZS82 235 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 ARMCX2Q7L311 632 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 CCDC91Q7Z6B0 441 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 ZNF410Q86VK4 478 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 CDR2LQ86X02 465 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 VSIG1Q86XK7 387 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 CEP120Q8N960 986 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 JOSD2Q8TAC2 188 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 AFG1LQ8WV93 481 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 EMID1Q96A84 441 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 OPTNQ96CV9 577 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 TBCBQ99426 244 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 FDXACB1Q9BRP7 624 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 MINDY3Q9H8M7 445 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 TXNRD2Q9NNW7 524 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 EURLQ9NYK6 297 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 XPO7Q9UIA9 1087 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 DERAQ9Y315 318 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 MAP4K5Q9Y4K4 846 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 ASMTLO95671 621 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 ERBB2P04626 1255 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 GJB1P08034 283 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 CREB1P16220 341 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 ARF4P18085 180 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 RPL22P35268 128 aaKnown RBP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 PSMA6P60900 246 aaKnown RBP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 DPYSL3Q14195 570 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 ZKSCAN8Q15776 578 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 PDK4Q16654 411 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 SLC10A6Q3KNW5 377 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 USP50Q70EL3 339 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 PRUNE1Q86TP1 453 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF295-AS1Q8N0V1 137 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 EMC1Q8N766 993 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 NAT8LQ8N9F0 302 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 FAM71DQ8N9W8 422 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 GLIS1Q8NBF1 620 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 SLC43A3Q8NBI5 491 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 ACSF2Q96CM8 615 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 KLHL29Q96CT2 875 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF668Q96K58 619 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 RAB3IPQ96QF0 476 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 PDZD7Q9H5P4 517 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 ACSS3Q9H6R3 686 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 SMYD3Q9H7B4 428 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 MLXIPLQ9NP71 852 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.71□□□□□ -1.18
ZNF540-206ENST00000589117 TXLNGQ9NUQ3 528 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 PAK5Q9P286 719 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 USH1CQ9Y6N9 552 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 A0A0G2JMZ2 1700 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 LCTP09848 1927 aa7.71□□□□□ -1.18
ZNF540-206ENST00000589117 RRN3P2A6NIE6 340 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 E7ESA3 106 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 GOLGA8MH3BSY2 632 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 H7C0C1 242 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 MGRN1O60291 552 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ZFXP17010 805 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-206ENST00000589117 KRT4P19013 534 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 TAC1P20366 129 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 TGM2P21980 687 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 IL1R2P27930 398 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 SDC4P31431 198 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ATP5OP48047 213 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 NDST1P52848 882 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ARHGAP1Q07960 439 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 ADCY1Q08828 1119 aa7.7□□□□□ -1.18
ZNF540-206ENST00000589117 BNIP1Q12981 228 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms