RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 DESP17661 470 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 GSCP56915 257 aaPredicted RBP9.5□□□□□ -0.89
CIRBP-218ENST00000588344 CYP4F8P98187 520 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 GSE1Q14687 1217 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 PTPN20Q4JDL3 420 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 FAM78AQ5JUQ0 283 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 C10orf76Q5T2E6 689 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 OR6B2Q6IFH4 312 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 SLC26A9Q7LBE3 791 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 SCD5Q86SK9 330 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 TC2NQ8N9U0 490 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 DEPDC1BQ8WUY9 529 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 ING5Q8WYH8 240 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 FAM149B1Q96BN6 582 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 ZSWIM3Q96MP5 696 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 PCDHB18PQ96TA0 734 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 ISCUQ9H1K1 167 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 TRPC7Q9HCX4 862 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 CYTH4Q9UIA0 394 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 CDH22Q9UJ99 828 aa9.5□□□□□ -0.89
CIRBP-218ENST00000588344 ANKRD62A6NC57 917 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 DDX3XO00571 662 aaKnown RBP eCLIP9.49□□□□□ -0.893e-13■■■□□ 14.7
CIRBP-218ENST00000588344 SLC9A3R1O14745 358 aaPredicted RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 COCHO43405 550 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 AKR1B10O60218 316 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 SLC34A2O95436 690 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 F9P00740 461 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 ERBB2P04626 1255 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 MBL2P11226 248 aaPredicted RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 NCAM1P13591 858 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 PSMC3P17980 439 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 GBP1P32455 592 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 NOS2P35228 1153 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 NNTQ13423 1086 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 SLC18A3Q16572 532 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 C10orf120Q5SQS8 335 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 E4F1Q66K89 784 aaPredicted RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 CC2D1AQ6P1N0 951 aaPredicted RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 MSANTD2Q6P1R3 559 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 ALKBH5Q6P6C2 394 aaKnown RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 WDR59Q6PJI9 974 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 OLFML1Q6UWY5 402 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 BHLHA9Q7RTU4 235 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 XYLT1Q86Y38 959 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 TMTC1Q8IUR5 882 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 MFSD6LQ8IWD5 586 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 YAF2Q8IY57 180 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 MCOLN2Q8IZK6 566 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 GJD3Q8N144 294 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 ARL14EPQ8N8R7 260 aaPredicted RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 FEZF2Q8TBJ5 459 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 CYP2S1Q96SQ9 504 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 DCLK3Q9C098 648 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 RNF38Q9H0F5 515 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 NHEJ1Q9H9Q4 299 aaPredicted RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 KCNK12Q9HB15 430 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 MRPL47Q9HD33 250 aaKnown RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 LUC7LQ9NQ29 371 aaKnown RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 PARVAQ9NVD7 372 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 ARHGAP20Q9P2F6 1191 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 ZNF510Q9Y2H8 683 aa9.49□□□□□ -0.89
CIRBP-218ENST00000588344 HBS1LQ9Y450 684 aaKnown RBP9.49□□□□□ -0.89
CIRBP-218ENST00000588344 E2F8A0AVK6 867 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 C2orf78A6NCI8 922 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 SIGLEC16A6NMB1 481 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 HEPACAM2A8MVW5 462 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 PIK3R2O00459 728 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 NRDCO43847 1150 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 IPO7O95373 1038 aaKnown RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 SLC2A3P11169 496 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 KRT3P12035 628 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 CYLC1P35663 651 aaPredicted RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 EIF4A3P38919 411 aaKnown RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 MATKP42679 507 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 PFKPQ01813 784 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 TDGQ13569 410 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 HTR4Q13639 388 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 ASTE1Q2TB18 679 aaPredicted RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 CCDC122Q5T0U0 273 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 ACBD5Q5T8D3 534 aaPredicted RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 FAM102AQ5T9C2 384 aaPredicted RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 PARM1Q6UWI2 310 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 MMS22LQ6ZRQ5 1243 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 FAM183BPQ6ZVS7 135 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 MON1BQ7L1V2 547 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 UNC45BQ8IWX7 931 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 UBALD2Q8IYN6 164 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 SLC44A3Q8N4M1 653 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 C3orf20Q8ND61 904 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 BPIFB1Q8TDL5 484 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 ADAMTS19Q8TE59 1207 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 IRF7Q92985 503 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 USP13Q92995 863 aaPredicted RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 OTUB2Q96DC9 234 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 SERPINB11Q96P15 392 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 SLC2A13Q96QE2 648 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 UHRF1Q96T88 793 aaPredicted RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 SELENOOQ9BVL4 669 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 TRMT61BQ9BVS5 477 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms