RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 HPSEQ9Y251 543 aa16.83■□□□□ 0.28
ERCC1-206ENST00000588300 TCRBV21S2A2A0A5A6 115 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 MAP3K13O43283 966 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 ADAM23O75077 832 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 VAMP7P51809 220 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 INCA1Q0VD86 236 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 C1orf220Q5T0J3 134 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 C10orf76Q5T2E6 689 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 CLEC20AQ6ZU45 233 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 HTR3DQ70Z44 454 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 LPCAT2Q7L5N7 544 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 TMEM25Q86YD3 366 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 PGBD3Q8N328 593 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 ZNF513Q8N8E2 541 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-206ENST00000588300 PIGKQ92643 395 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 WBP2Q969T9 261 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 SPATA32Q96LK8 384 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 HNRNPABQ99729 332 aaKnown RBP16.82■□□□□ 0.28
ERCC1-206ENST00000588300 TMEM9BQ9NQ34 198 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 CYLDQ9NQC7 956 aa16.82■□□□□ 0.28
ERCC1-206ENST00000588300 LSM7Q9UK45 103 aaKnown RBP16.82■□□□□ 0.28
ERCC1-206ENST00000588300 MAP1BP46821 2468 aaKnown RBP16.82■□□□□ 0.28
ERCC1-206ENST00000588300 MYO18AQ92614 2054 aaKnown RBP16.81■□□□□ 0.28
ERCC1-206ENST00000588300 PATE3B3GLJ2 98 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 KRT37O76014 449 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 NR2F2P24468 414 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 ATP5C1P36542 298 aaKnown RBP16.81■□□□□ 0.28
ERCC1-206ENST00000588300 SYKP43405 635 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 PGFP49763 221 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 KRT85P78386 507 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 SHC2P98077 582 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 NFIL3Q16649 462 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 GRAMD4Q6IC98 578 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 PSAPL1Q6NUJ1 521 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 INTS8Q75QN2 995 aaKnown RBP16.81■□□□□ 0.28
ERCC1-206ENST00000588300 GPRIN1Q7Z2K8 1008 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 JAKMIP2Q96AA8 810 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 CYFIP2Q96F07 1278 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 TWNKQ96RR1 684 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 NT5C1AQ9BXI3 368 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 KLF16Q9BXK1 252 aaPredicted RBP16.81■□□□□ 0.28
ERCC1-206ENST00000588300 DNAI2Q9GZS0 605 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 CYP3A43Q9HB55 503 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 PNPLA8Q9NP80 782 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.81■□□□□ 0.282e-12■■■■■ 298.1
ERCC1-206ENST00000588300 EVLQ9UI08 416 aaPredicted RBP16.81■□□□□ 0.28
ERCC1-206ENST00000588300 SCML2Q9UQR0 700 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 PCDHA5Q9Y5H7 936 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 LAMA1P25391 3075 aa16.81■□□□□ 0.28
ERCC1-206ENST00000588300 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 CYP26A1O43174 497 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 RHOBTB3O94955 611 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 TBX18O95935 607 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 TRIM49P0CI25 452 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 TRIM49CP0CI26 452 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 KRT13P13646 458 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 ACO1P21399 889 aaKnown RBP16.8■□□□□ 0.28
ERCC1-206ENST00000588300 DPP6P42658 865 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 GCLMP48507 274 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 NOVA1P51513 510 aaKnown RBP16.8■□□□□ 0.28
ERCC1-206ENST00000588300 MAP7D1Q3KQU3 841 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 SPDYCQ5MJ68 293 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 TMEFF1Q8IYR6 380 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 CCDC150Q8NCX0 1101 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 TAS1R2Q8TE23 839 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 XPO6Q96QU8 1125 aaKnown RBP16.8■□□□□ 0.28
ERCC1-206ENST00000588300 BBS2Q9BXC9 721 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 NIF3L1Q9GZT8 377 aa16.8■□□□□ 0.28
ERCC1-206ENST00000588300 DNAJC17Q9NVM6 304 aaKnown RBP16.8■□□□□ 0.28
ERCC1-206ENST00000588300 CEP192Q8TEP8 1941 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 HHLA1C9JL84 531 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 NEDD8-MDP1E9PL57 170 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 CACNG3O60359 315 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 GREM1O60565 184 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 PRR29P0C7W0 189 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 HOXB2P14652 356 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 RPL13P26373 211 aaKnown RBP16.79■□□□□ 0.28
ERCC1-206ENST00000588300 NTSR1P30989 418 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 IRX4P78413 519 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 ENPEPQ07075 957 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 LMAN2Q12907 356 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 TRIM61Q5EBN2 209 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 KLHDC10Q6PID8 442 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 SYT12Q8IV01 421 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 FAM186BQ8IYM0 893 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 FRMD1Q8N878 549 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 NUSAP1Q9BXS6 441 aaKnown RBP16.79■□□□□ 0.28
ERCC1-206ENST00000588300 APOBEC3GQ9HC16 384 aaKnown RBP16.79■□□□□ 0.28
ERCC1-206ENST00000588300 OSER1Q9NX31 292 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 MARK1Q9P0L2 795 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 WDR35Q9P2L0 1181 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 MBD1Q9UIS9 605 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-206ENST00000588300 STARD13Q9Y3M8 1113 aa16.79■□□□□ 0.28
ERCC1-206ENST00000588300 FAM237AA0A1B0GTK4 181 aa16.78■□□□□ 0.28
ERCC1-206ENST00000588300 A0A1W2PQH9 124 aa16.78■□□□□ 0.28
ERCC1-206ENST00000588300 CDX4O14627 284 aaPredicted RBP16.78■□□□□ 0.28
ERCC1-206ENST00000588300 TRIM24O15164 1050 aa16.78■□□□□ 0.28
ERCC1-206ENST00000588300 ZBTB24O43167 697 aaPredicted RBP16.78■□□□□ 0.28
ERCC1-206ENST00000588300 CILPO75339 1184 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms