RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 ACDQ96AP0 544 aa12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 CCSER2Q9H7U1 834 aa12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 CNGB3Q9NQW8 809 aa12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 PRMT8Q9NR22 394 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 NCDNQ9UBB6 729 aa12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 ZNF510Q9Y2H8 683 aa12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 PCDHGA2Q9Y5H1 932 aa12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 USP3Q9Y6I4 520 aa12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 ANAPC1Q9H1A4 1944 aa12.33□□□□□ -0.44
PRKCSH-207ENST00000588269 A0A1W2PQH9 124 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 KCNJ18B7U540 433 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 HHLA1C9JL84 531 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 TRDMT1O14717 391 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 FBXO21O94952 628 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 CHRNB1P11230 501 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 ADH5P11766 374 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 RARGP13631 454 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 GJA4P35212 333 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 EIF2DP41214 584 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 CXCL12P48061 93 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 TKTL1P51854 596 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 SNX16P57768 344 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 COG7P83436 770 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 PDE4CQ08493 712 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 ADIGQ0VDE8 80 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 MTAPQ13126 283 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 CCINQ13939 588 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 KCNJ12Q14500 433 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 PUM1Q14671 1186 aaKnown RBP eCLIP12.32□□□□□ -0.442e-6■□□□□ 8.9
PRKCSH-207ENST00000588269 CNGA2Q16280 664 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 TMEM196Q5HYL7 178 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 RAB41Q5JT25 222 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 RBM43Q6ZSC3 357 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 TTC30AQ86WT1 665 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 ZNF276Q8N554 614 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 LMO3Q8TAP4 145 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 ENOX1Q8TC92 643 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 ATRIPQ8WXE1 791 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 NOX5Q96PH1 765 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 TUBGCP2Q9BSJ2 902 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 DCLK3Q9C098 648 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 RNF38Q9H0F5 515 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 NDST4Q9H3R1 872 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 UBE2TQ9NPD8 197 aaPredicted RBP12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 NFE2L3Q9Y4A8 694 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 CEP83Q9Y592 693 aa12.32□□□□□ -0.44
PRKCSH-207ENST00000588269 CYP17A1P05093 508 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 IRF1P10914 325 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 GNA15P30679 374 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 ACADSBP45954 432 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 ZNF132P52740 706 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 YWHAGP61981 247 aaKnown RBP eCLIP12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 MYL5Q02045 173 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 GAD2Q05329 585 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 VWA3BQ502W6 1294 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 TXNDC11Q6PKC3 985 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 ZNF687Q8N1G0 1237 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 SCML4Q8N228 414 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 RIN3Q8TB24 985 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 GPT2Q8TD30 523 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 IRGQQ8WZA9 623 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 HSFY1Q96LI6 401 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 CRACR2AQ9BSW2 395 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 PARD6AQ9NPB6 346 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 ZSCAN32Q9NX65 697 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 RASAL2Q9UJF2 1139 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 SMG5Q9UPR3 1016 aaKnown RBP12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 DAAM1Q9Y4D1 1078 aa12.31□□□□□ -0.44
PRKCSH-207ENST00000588269 DCDC2BA2VCK2 349 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 THAP12O43422 761 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 KRT37O76014 449 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 PAPSS2O95340 614 aaPredicted RBP12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 USP8P40818 1118 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 ATXN1P54253 815 aaKnown RBP12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 BPIFB4P59827 614 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 ZNF445P59923 1031 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 DHCR24Q15392 516 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 TCP11X2Q5H9J9 407 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 MIB1Q86YT6 1006 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 ZBTB44Q8NCP5 570 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 SECISBP2LQ93073 1101 aaKnown RBP12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 PLD4Q96BZ4 506 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 ZFRQ96KR1 1074 aaKnown RBP12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 ULBP1Q9BZM6 244 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 ABCC13Q9NSE7 274 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 CNTN6Q9UQ52 1028 aa12.3□□□□□ -0.44
PRKCSH-207ENST00000588269 DNAH14Q0VDD8 3507 aa12.29□□□□□ -0.44
PRKCSH-207ENST00000588269 HOXC11O43248 304 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms