RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GJC1P36383 396 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 SSR1P43307 286 aaKnown RBP11.82□□□□□ -0.52
VMP1-207ENST00000588131 SULT1E1P49888 294 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 PEX5P50542 639 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 ATXN1P54253 815 aaKnown RBP11.82□□□□□ -0.52
VMP1-207ENST00000588131 SLC25A11Q02978 314 aaKnown RBP11.82□□□□□ -0.52
VMP1-207ENST00000588131 DCAF6Q58WW2 860 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 DCAF12L1Q5VU92 463 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 ADGRD2Q7Z7M1 963 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 GDPD5Q8WTR4 605 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 COG1Q8WTW3 980 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 FAM172AQ8WUF8 416 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 FBXO32Q969P5 355 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 CEP295NLQ96MC4 621 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 PEBP4Q96S96 227 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 NPY6RQ99463 290 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 TTLL2Q9BWV7 592 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 FBXO44Q9H4M3 255 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 SLC28A3Q9HAS3 691 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 COMMD8Q9NX08 183 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 OSER1Q9NX31 292 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 EHD2Q9NZN4 543 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 MAFFQ9ULX9 164 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 MAGED2Q9UNF1 606 aaPredicted RBP11.82□□□□□ -0.52
VMP1-207ENST00000588131 PCDHA3Q9Y5H8 950 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 MRFAP1Q9Y605 127 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 SAR1BQ9Y6B6 198 aa11.82□□□□□ -0.52
VMP1-207ENST00000588131 ZNF638Q14966 1978 aaKnown RBP11.81□□□□□ -0.52
VMP1-207ENST00000588131 CCDC66A2RUB6 948 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 RFXAPO00287 272 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 CAPN9O14815 690 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 PSTPIP1O43586 416 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 CLASP2O75122 1294 aaKnown RBP11.81□□□□□ -0.52
VMP1-207ENST00000588131 GLUD1P00367 558 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 C8AP07357 584 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 NCAM1P13591 858 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 PRLRP16471 622 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 TCP1P17987 556 aaKnown RBP11.81□□□□□ -0.52
VMP1-207ENST00000588131 IL1R2P27930 398 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 MIPP30301 263 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 ALDH1A3P47895 512 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 CLCN4P51793 760 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 HDAC4P56524 1084 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 TAF10Q12962 218 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 PLD1Q13393 1074 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 ZNF211Q13398 564 aaPredicted RBP11.81□□□□□ -0.52
VMP1-207ENST00000588131 ACAP1Q15027 740 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 SLC25A52Q3SY17 297 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 ATP13A4Q4VNC1 1196 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 AADACL2Q6P093 401 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 CYP4V2Q6ZWL3 525 aaPredicted RBP11.81□□□□□ -0.52
VMP1-207ENST00000588131 BNIPLQ7Z465 357 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 RHOT1Q8IXI2 618 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 UBL4BQ8N7F7 174 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 KREMEN2Q8NCW0 462 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 SLC7A14Q8TBB6 771 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 ADAM32Q8TC27 787 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 CENPIQ92674 756 aaPredicted RBP11.81□□□□□ -0.52
VMP1-207ENST00000588131 GOLGA1Q92805 767 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 NT5C3BQ969T7 300 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 TIFAQ96CG3 184 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 ACSF2Q96CM8 615 aaPredicted RBP11.81□□□□□ -0.52
VMP1-207ENST00000588131 MS4A14Q96JA4 679 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 CAPZA3Q96KX2 299 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 ZWILCHQ9H900 591 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 KLHL11Q9NVR0 708 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 PCSK1NQ9UHG2 260 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 CDC23Q9UJX2 597 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 STAP1Q9ULZ2 295 aa11.81□□□□□ -0.52
VMP1-207ENST00000588131 PDE4DIPQ5VU43 2346 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 SYNJ2BP-COX16A0A087WUM0 186 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 M0QYT0 321 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 PER2O15055 1255 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 RNF8O76064 485 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 ENDOD1O94919 500 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 TRUB2O95900 331 aaKnown RBP11.8□□□□□ -0.52
VMP1-207ENST00000588131 ZDHHC11BP0C7U3 371 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 CSH1P0DML2 217 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 CSH2P0DML3 217 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 EPCAMP16422 314 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 PCK1P35558 622 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 SMAD3P84022 425 aaKnown RBP11.8□□□□□ -0.52
VMP1-207ENST00000588131 VEPH1Q14D04 833 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 BTBD8Q5XKL5 378 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 PDE12Q6L8Q7 609 aaKnown RBP11.8□□□□□ -0.52
VMP1-207ENST00000588131 BEND5Q7L4P6 421 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 STRADAQ7RTN6 431 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 TAC4Q86UU9 113 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 MON1AQ86VX9 555 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 DQX1Q8TE96 717 aaKnown RBP11.8□□□□□ -0.52
VMP1-207ENST00000588131 SLC22A17Q8WUG5 538 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 LMAN2LQ9H0V9 348 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 L2HGDHQ9H9P8 463 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 ZNF334Q9HCZ1 680 aaPredicted RBP11.8□□□□□ -0.52
VMP1-207ENST00000588131 ABCC13Q9NSE7 274 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 SMARCAL1Q9NZC9 954 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 COX16Q9P0S2 106 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 NUDT5Q9UKK9 219 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 USP18Q9UMW8 372 aa11.8□□□□□ -0.52
VMP1-207ENST00000588131 PDE2AO00408 941 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms