RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 MTIF2P46199 727 aaKnown RBP16.62■□□□□ 0.25
NCLN-203ENST00000587740 LHX1P48742 406 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 FMO5P49326 533 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 MYL7Q01449 175 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 RING1Q06587 406 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 MESP2Q0VG99 397 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 CETN1Q12798 172 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 KCNH2Q12809 1159 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 ACAP1Q15027 740 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 CRY1Q16526 586 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 ANO6Q4KMQ2 910 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 CBWD6Q4V339 395 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 CBWD3Q5JTY5 395 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 CBWD5Q5RIA9 395 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 C11orf74Q86VG3 221 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 OSTM1Q86WC4 334 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 IRF2BP1Q8IU81 584 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 ADGRF2Q8IZF7 708 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 ZCCHC14Q8WYQ9 949 aaKnown RBP16.62■□□□□ 0.25
NCLN-203ENST00000587740 ACBD6Q9BR61 282 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 ABCB6Q9NP58 842 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 RAB20Q9NX57 234 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 DDX43Q9NXZ2 648 aaKnown RBP16.62■□□□□ 0.25
NCLN-203ENST00000587740 UXTQ9UBK9 157 aaPredicted RBP16.62■□□□□ 0.25
NCLN-203ENST00000587740 EVLQ9UI08 416 aaPredicted RBP16.62■□□□□ 0.25
NCLN-203ENST00000587740 GTF3C4Q9UKN8 822 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 MMP17Q9ULZ9 603 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 NFE2L3Q9Y4A8 694 aa16.62■□□□□ 0.25
NCLN-203ENST00000587740 HELZP42694 1942 aaKnown RBP16.62■□□□□ 0.25
NCLN-203ENST00000587740 ITPR1Q14643 2758 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 LAMA5O15230 3695 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 AFPP02771 609 aaKnown RBP16.61■□□□□ 0.25
NCLN-203ENST00000587740 FAM163BP0C2L3 166 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 TCF3P15923 654 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 PTGER3P43115 390 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 RPL10AP62906 217 aaKnown RBP16.61■□□□□ 0.25
NCLN-203ENST00000587740 NR1H3Q13133 447 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 TRIM61Q5EBN2 209 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 INTS6LQ5JSJ4 861 aaKnown RBP16.61■□□□□ 0.25
NCLN-203ENST00000587740 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.61■□□□□ 0.254e-8■■■■■ 66.6
NCLN-203ENST00000587740 SAMSN1Q9NSI8 373 aaKnown RBP16.61■□□□□ 0.25
NCLN-203ENST00000587740 KLK13Q9UKR3 277 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 ARHGAP26Q9UNA1 814 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 NEUROG3Q9Y4Z2 214 aa16.61■□□□□ 0.25
NCLN-203ENST00000587740 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 PMM2O15305 246 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 P4HA2O15460 535 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 TACC1O75410 805 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 HDCP19113 662 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 WARSP23381 471 aaKnown RBP16.6■□□□□ 0.25
NCLN-203ENST00000587740 P2RY2P41231 377 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 NOP14P78316 857 aaKnown RBP16.6■□□□□ 0.25
NCLN-203ENST00000587740 MYL5Q02045 173 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 ZSCAN23Q3MJ62 389 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 HSP90AA4PQ58FG1 418 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 SPOPLQ6IQ16 392 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 SCARA5Q6ZMJ2 495 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 ARMCX6Q7L4S7 300 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 LIMS2Q7Z4I7 341 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 PIP4P1Q86T03 277 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 TMEFF1Q8IYR6 380 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 SEMA4DQ92854 862 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 SNX25Q9H3E2 840 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 MBD1Q9UIS9 605 aaPredicted RBP16.6■□□□□ 0.25
NCLN-203ENST00000587740 COQ4Q9Y3A0 265 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 ADAMTS9Q9P2N4 1935 aa16.6■□□□□ 0.25
NCLN-203ENST00000587740 SPAARA0A1B0GVQ0 90 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 KCNJ18B7U540 433 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 TAF4O00268 1085 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 GABRDO14764 452 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 NFATC1O95644 943 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 ENGP17813 658 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 PCSK1P29120 753 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 GNL1P36915 607 aaPredicted RBP16.59■□□□□ 0.25
NCLN-203ENST00000587740 MAPK8P45983 427 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 SLC6A11P48066 632 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 KCNJ12Q14500 433 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 MAN2A1Q16706 1144 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 CFAP221Q4G0U5 840 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 TTC30AQ86WT1 665 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 SCN4BQ8IWT1 228 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 IL17RCQ8NAC3 791 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 CCDC26Q8TAB7 109 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 KBTBD7Q8WVZ9 684 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 MRPL45Q9BRJ2 306 aaKnown RBP16.59■□□□□ 0.25
NCLN-203ENST00000587740 APOBEC3GQ9HC16 384 aaKnown RBP16.59■□□□□ 0.25
NCLN-203ENST00000587740 FSCN3Q9NQT6 498 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 LHX6Q9UPM6 363 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 MSRB2Q9Y3D2 182 aa16.59■□□□□ 0.25
NCLN-203ENST00000587740 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.25
NCLN-203ENST00000587740 SGK1O00141 431 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 TNFRSF10BO14763 440 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 CAPNS1P04632 268 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 CYP17A1P05093 508 aa16.58■□□□□ 0.24
NCLN-203ENST00000587740 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
NCLN-203ENST00000587740 EEF1GP26641 437 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms