RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ACOT1Q86TX2 421 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 CRYBG2Q8N1P7 616 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 ZMIZ2Q8NF64 920 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 TMEM174Q8WUU8 243 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 WBP2Q969T9 261 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 SMOQ99835 787 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 SDCBP2Q9H190 292 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 CSNK1G1Q9HCP0 422 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 TLR8Q9NR97 1041 aaKnown RBP14.87□□□□□ -0.03
DNMT1-213ENST00000587604 KRT82Q9NSB4 513 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 WDFY3Q8IZQ1 3526 aa14.87□□□□□ -0.03
DNMT1-213ENST00000587604 A0A1W2PQF6 199 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 LRRIQ3A6PVS8 624 aaPredicted RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 TRIM24O15164 1050 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 ZBTB24O43167 697 aaPredicted RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 GREM1O60565 184 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 BEST1O76090 585 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 CLSTN1O94985 981 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 VNN1O95497 513 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 RPN1P04843 607 aaKnown RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 CFIP05156 583 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 CENPBP07199 599 aaPredicted RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 SERPINF2P08697 491 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 IRF1P10914 325 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 P4HA1P13674 534 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 HOXB2P14652 356 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 PGFP49763 221 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 ATXN3P54252 364 aaPredicted RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 GFPT1Q06210 699 aaPredicted RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 ZNF33AQ06730 810 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 CUL4BQ13620 913 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 GRAMD4Q6IC98 578 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 SDE2Q6IQ49 451 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 SCARA5Q6ZMJ2 495 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 RABEPKQ7Z6M1 372 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 PIP4P1Q86T03 277 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 UNC93AQ86WB7 457 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 MIB1Q86YT6 1006 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 SLC9A9Q8IVB4 645 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 SLC2A14Q8TDB8 520 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 GATA6Q92908 595 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 XPO6Q96QU8 1125 aaKnown RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 KLF16Q9BXK1 252 aaPredicted RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 DMAC2Q9NW81 257 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 CALCOCO1Q9P1Z2 691 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 WDR35Q9P2L0 1181 aa14.86□□□□□ -0.03
DNMT1-213ENST00000587604 RALYQ9UKM9 306 aaKnown RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 ATXN2Q99700 1313 aaKnown RBP14.86□□□□□ -0.03
DNMT1-213ENST00000587604 K7ELQ4 463 aaPredicted RBP14.85□□□□□ -0.03
DNMT1-213ENST00000587604 CACNG3O60359 315 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 ZNF217O75362 1048 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 TBX18O95935 607 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 CCDC130P13994 396 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 ATP5C1P36542 298 aaKnown RBP14.85□□□□□ -0.03
DNMT1-213ENST00000587604 WASP42768 502 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 AFMP43652 599 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 NDST1P52848 882 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 MAP3K7CLP57077 242 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 GOLGA8FQ08AF8 430 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 GOLGA8DPQ0D2H9 430 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 EGFLAMQ63HQ2 1017 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 CHPFQ8IZ52 775 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 HDDC3Q8N4P3 179 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 DEFB119Q8N690 84 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
DNMT1-213ENST00000587604 TAF4BQ92750 862 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 ELMO3Q96BJ8 720 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 BBS2Q9BXC9 721 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 CAPN10Q9HC96 672 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 CD248Q9HCU0 757 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 CYLDQ9NQC7 956 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 DNAJC17Q9NVM6 304 aaKnown RBP14.85□□□□□ -0.03
DNMT1-213ENST00000587604 FAM13BQ9NYF5 915 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 MARK1Q9P0L2 795 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 NEUROG3Q9Y4Z2 214 aa14.85□□□□□ -0.03
DNMT1-213ENST00000587604 KNL1Q8NG31 2342 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 PCDH15Q96QU1 1955 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 SPEGQ15772 3267 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.84□□□□□ -0.03
DNMT1-213ENST00000587604 IGHV1OR15-9A0A0B4J2B8 117 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 NEDD8-MDP1E9PL57 170 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 OPHN1O60890 802 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 TYRP14679 529 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 DLG4P78352 724 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 ZACNQ401N2 412 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 KLHDC10Q6PID8 442 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 C12orf29Q8N999 325 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 ACOX2Q99424 681 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 GABRG3Q99928 467 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 GTPBP2Q9BX10 602 aaKnown RBP14.84□□□□□ -0.03
DNMT1-213ENST00000587604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.84□□□□□ -0.032e-6■■■■■ 55.6
DNMT1-213ENST00000587604 LSM7Q9UK45 103 aaKnown RBP14.84□□□□□ -0.03
DNMT1-213ENST00000587604 PCDHA7Q9UN72 937 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 SCML2Q9UQR0 700 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 ANKRD11Q6UB99 2663 aaPredicted RBP14.84□□□□□ -0.03
DNMT1-213ENST00000587604 DMXL2Q8TDJ6 3036 aa14.84□□□□□ -0.03
DNMT1-213ENST00000587604 SPAARA0A1B0GVQ0 90 aa14.83□□□□□ -0.04
DNMT1-213ENST00000587604 A0A1W2PQD8 194 aa14.83□□□□□ -0.04
DNMT1-213ENST00000587604 PRRT4C9JH25 899 aa14.83□□□□□ -0.04
DNMT1-213ENST00000587604 ARHGAP33O14559 1287 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms