RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 TRIM65Q6PJ69 517 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 WDR59Q6PJI9 974 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 RAD9BQ6WBX8 426 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 ENOSF1Q7L5Y1 443 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 REXO1L1PQ8IX06 675 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 ZSWIM2Q8NEG5 633 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 USP13Q92995 863 aaPredicted RBP8.3□□□□□ -1.08
VMP1-204ENST00000587259 E2F7Q96AV8 911 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 SLC22A12Q96S37 553 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 CYP2S1Q96SQ9 504 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 FAM83CQ9BQN1 747 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 PI4K2AQ9BTU6 479 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 GPR88Q9GZN0 384 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 ZCWPW1Q9H0M4 648 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 GANQ9H2C0 597 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 SLC8A2Q9UPR5 921 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 STYXL1Q9Y6J8 313 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 EML5Q05BV3 1969 aa8.3□□□□□ -1.08
VMP1-204ENST00000587259 SCN1AP35498 2009 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 C4orf47A7E2U8 309 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 PATE3B3GLJ2 98 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 CYB561D2O14569 222 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 DYNC1I1O14576 645 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 SCAMP3O14828 347 aaKnown RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 TADA3O75528 432 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 KCNK5O95279 499 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 ODC1P11926 461 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 HMGA1P17096 107 aaKnown RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 TYMPP19971 482 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 ACAT1P24752 427 aaKnown RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 CASQ1P31415 396 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 CNR2P34972 360 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 KLK7P49862 253 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 KIF11P52732 1056 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 VAV2P52735 878 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 MLLT6P55198 1093 aaPredicted RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 SEC13P55735 322 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 GNG11P61952 73 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 CREB5Q02930 508 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 KLHL30Q0D2K2 578 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 RUNX3Q13761 415 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 RAPGEF1Q13905 1077 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 IFI16Q16666 785 aaKnown RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 DDR2Q16832 855 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 PLK5Q496M5 336 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 TMEM196Q5HYL7 178 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 PLA2G2CQ5R387 149 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 KLHDC7AQ5VTJ3 777 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 KRT39Q6A163 491 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 SFTPA1Q8IWL2 248 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 CMTM8Q8IZV2 173 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 RPLP0P6Q8NHW5 317 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 UBE2Q2Q8WVN8 375 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 ZNF592Q92610 1267 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 ZFRQ96KR1 1074 aaKnown RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 CALR3Q96L12 384 aaKnown RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 ALS2CR12Q96Q35 445 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 FNBP1Q96RU3 617 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 CBWD1Q9BRT8 395 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 DESI2Q9BSY9 194 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 MSTO1Q9BUK6 570 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 TPSD1Q9BZJ3 242 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 DUSP15Q9H1R2 295 aaPredicted RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 RPF1Q9H9Y2 349 aaKnown RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 PLEKHA5Q9HAU0 1116 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 TMEM8AQ9HCN3 771 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 TRPC7Q9HCX4 862 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 NLRC4Q9NPP4 1024 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 DNAI1Q9UI46 699 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 MAFFQ9ULX9 164 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 WNT6Q9Y6F9 365 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 NUP210Q8TEM1 1887 aaPredicted RBP8.29□□□□□ -1.08
VMP1-204ENST00000587259 GREB1Q4ZG55 1949 aa8.29□□□□□ -1.08
VMP1-204ENST00000587259 SPEGQ15772 3267 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 ZZEF1O43149 2961 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 IGF2RP11717 2491 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 A0A0B4J269 797 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 ANO9A1A5B4 782 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 CTAGE9A4FU28 777 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 PIRO00625 290 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 OGTO15294 1046 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 NOL4O94818 638 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 F11P03951 625 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 HAPLN1P10915 354 aaPredicted RBP8.28□□□□□ -1.08
VMP1-204ENST00000587259 CYP3A5P20815 502 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 BCKDHBP21953 392 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 HOXA6P31267 233 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 JAM2P57087 298 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 CYP24A1Q07973 514 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 MESP2Q0VG99 397 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 GRSF1Q12849 480 aaKnown RBP eCLIP8.28□□□□□ -1.08
VMP1-204ENST00000587259 FOXC1Q12948 553 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 MTF1Q14872 753 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 TMEM132DQ14C87 1099 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 VEPH1Q14D04 833 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 PSMD6Q15008 389 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 TAF12Q16514 161 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 SLC18A3Q16572 532 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 CCDC122Q5T0U0 273 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 RNF43Q68DV7 783 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms