RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TWISTNBQ3B726 338 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 C19orf54Q5BKX5 351 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 EPHA10Q5JZY3 1008 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 KIAA1841Q6NSI8 718 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 DOK3Q7L591 496 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF804AQ7Z570 1209 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 APOBEC3FQ8IUX4 373 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 TDHQ8IZJ6 230 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 C3orf20Q8ND61 904 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 MDGA1Q8NFP4 955 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 OR5AN1Q8NGI8 311 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CCHCR1Q8TD31 782 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 LMBR1Q8WVP7 490 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 HDAC2Q92769 488 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 DLG3Q92796 817 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GOLGA1Q92805 767 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 TNPO1Q92973 898 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 LRRC46Q96FV0 321 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SDF4Q9BRK5 362 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CASS4Q9NQ75 786 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 STARD7Q9NQZ5 370 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 KRT84Q9NSB2 600 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 PCDHB6Q9Y5E3 794 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 PCDHA3Q9Y5H8 950 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SCINQ9Y6U3 715 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 XDHP47989 1333 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ANKRD18BA2A2Z9 1011 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 MAN2B1O00754 1011 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 USP12O75317 370 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 TIPRLO75663 272 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CAMTA2O94983 1202 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 LMNAP02545 664 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ZFYP08048 801 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 BMP5P22003 454 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SERPINB3P29508 390 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CXCR5P32302 372 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 PAPOLAP51003 745 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CD83Q01151 205 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 MVPQ14764 893 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 P3H1Q32P28 736 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 TMEM95Q3KNT9 176 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 KHDC1LQ5JSQ8 128 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 TMEM31Q5JXX7 168 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF783Q6ZMS7 281 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GAREM2Q75VX8 874 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 RNF44Q7L0R7 432 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GPR155Q7Z3F1 870 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 NBPF5PQ86XG9 351 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 NLGN4YQ8NFZ3 816 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 OR6B3Q8NGW1 331 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CACTINQ8WUQ7 758 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GAB3Q8WWW8 586 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 DNAAF4Q8WXU2 420 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 RAB24Q969Q5 203 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GNRHR2Q96P88 292 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 EIF3CQ99613 913 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 TMEM140Q9NV12 185 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 FBXL7Q9UJT9 491 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ATP6V0A2Q9Y487 856 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CTDP1Q9Y5B0 961 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 NUP98P52948 1817 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 A0A0A6YYJ9 748 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 HMX3A6NHT5 357 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 B4DLN1 442 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 FRS3O43559 492 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 FGAP02671 866 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SERPINB2P05120 415 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 IFIT1P09914 478 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 RXRAP19793 462 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 FBLP22087 321 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ELF1P32519 619 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 PPM1AP35813 382 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 IL15P40933 162 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ADCY7P51828 1080 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF280AP59817 542 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ATP2C1P98194 919 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 PPFIA1Q13136 1202 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 TAF5Q15542 800 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 MUM1Q2TAK8 710 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ATPAF1Q5TC12 328 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 IZUMO3Q5VZ72 239 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 NAIF1Q69YI7 327 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ERAP2Q6P179 960 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 KLHL17Q6TDP4 642 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 HEATR3Q7Z4Q2 680 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF575Q86XF7 245 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GATAD2AQ86YP4 633 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 IL17REQ8NFR9 667 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CPT1CQ8TCG5 803 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 NACC2Q96BF6 587 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 COA7Q96BR5 231 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 MYEOVQ96EZ4 313 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CYFIP2Q96F07 1278 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SLC35A4Q96G79 324 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SUCLG2Q96I99 432 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SGCZQ96LD1 299 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 NEUROD6Q96NK8 337 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 ASB2Q96Q27 587 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SH2D3AQ9BRG2 576 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 MMRN2Q9H8L6 949 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms