RNA–Protein interactions for RNA: ENST00000584142.5

TRIM16-225, Transcript of tripartite motif containing 16, human

TSL 4

Gene TRIM16, Length 565 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-225	ENST00000584142	PLD1	Q13393	1074 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	PPP1R7	Q15435	360 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	EFHC2	Q5JST6	749 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	ERMARD	Q5T6L9	678 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	SLC8B1	Q6J4K2	584 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	WDR93	Q6P2C0	686 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	CCDC137	Q6PK04	289 aa	Known RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	DENND5B	Q6ZUT9	1274 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	GPRIN1	Q7Z2K8	1008 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	TADA2B	Q86TJ2	420 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	MON1A	Q86VX9	555 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	TMEM173	Q86WV6	379 aa	Predicted RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	HERC6	Q8IVU3	1022 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	C12orf50	Q8NA57	414 aa	Predicted RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	PDZD8	Q8NEN9	1154 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	HERVK_113	Q902F9	699 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	DPF3	Q92784	378 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	RNF34	Q969K3	372 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	FBXO32	Q969P5	355 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	VWCE	Q96DN2	955 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	SPATA17	Q96L03	361 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	CCDC114	Q96M63	670 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	NPY6R	Q99463	290 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	LRRC1	Q9BTT6	524 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	HEMGN	Q9BXL5	484 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	PARD6B	Q9BYG5	372 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	DDX47	Q9H0S4	455 aa	Known RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	ANKZF1	Q9H8Y5	726 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	PRDM16	Q9HAZ2	1276 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	CHST7	Q9NS84	486 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	OLA1	Q9NTK5	396 aa	Known RBP	11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	HSFX1	Q9UBD0	423 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	AP4E1	Q9UPM8	1137 aa		11.13	□□□□□ -0.63
TRIM16-225	ENST00000584142	hCG_1818297	A0A087WSY0	165 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	YJEFN3	A6XGL0	299 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	ZNF487	B1APH4	448 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142		E7ENQ6	273 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142		H3BRJ5	948 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	TBC1D4	O60343	1298 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	GABBR2	O75899	941 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	HAPLN1	P10915	354 aa	Predicted RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	KDELR1	P24390	212 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	YWHAQ	P27348	245 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	OR1D2	P34982	312 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	CDKN2B	P42772	138 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	ALDH1A3	P47895	512 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	CDR1	P51861	262 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	ZNF135	P52742	658 aa	Predicted RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	ROR1	Q01973	937 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	NAA30	Q147X3	362 aa	Predicted RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	CCNG2	Q16589	344 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	CYP1B1	Q16678	543 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	KCNT1	Q5JUK3	1230 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	TMEM240	Q5SV17	173 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	BSPRY	Q5W0U4	402 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	AADACL2	Q6P093	401 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	MFSD7	Q6UXD7	560 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	RNF19B	Q6ZMZ0	732 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	GSTA5	Q7RTV2	222 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	MTERF4	Q7Z6M4	381 aa	Known RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	RNF168	Q8IYW5	571 aa	Predicted RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	VPS52	Q8N1B4	723 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	CMAS	Q8NFW8	434 aa	Predicted RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	CCHCR1	Q8TD31	782 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	ANKRD7	Q92527	254 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	CENPI	Q92674	756 aa	Predicted RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	FERMT1	Q9BQL6	677 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	ZNF670	Q9BS34	389 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	SNRNP25	Q9BV90	132 aa	Known RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	DHX35	Q9H5Z1	703 aa	Known RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	ARFGAP3	Q9NP61	516 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	TLR8	Q9NR97	1041 aa	Known RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	FAM114A2	Q9NRY5	505 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	DDIT4	Q9NX09	232 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	COX16	Q9P0S2	106 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	AFF4	Q9UHB7	1163 aa	Known RBP	11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	SCML2	Q9UQR0	700 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	NR2E3	Q9Y5X4	410 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	USP3	Q9Y6I4	520 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	PATJ	Q8NI35	1801 aa		11.12	□□□□□ -0.63
TRIM16-225	ENST00000584142	COL4A6	Q14031	1691 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	PRRG1	O14668	218 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	APOL1	O14791	398 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	RAD51C	O43502	376 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	ZNF189	O75820	626 aa	Predicted RBP	11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	FGF18	O76093	207 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	SLC2A3	P11169	496 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	TCF4	P15884	667 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	SYN1	P17600	705 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	IL1R2	P27930	398 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	CTNNB1	P35222	781 aa		11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	COIL	P38432	576 aa	Predicted RBP	11.11	□□□□□ -0.63
TRIM16-225	ENST00000584142	HDAC4	P56524	1084 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms