RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 KRT13P13646 458 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 CCDC130P13994 396 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 DHPSP49366 369 aaPredicted RBP16.57■□□□□ 0.24
SKA2-209ENST00000583976 VAMP7P51809 220 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 BIRC3Q13489 604 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 TRPC3Q13507 836 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 USP39Q53GS9 565 aaKnown RBP16.57■□□□□ 0.24
SKA2-209ENST00000583976 LY6G5CQ5SRR4 150 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 PAQR9Q6ZVX9 377 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 BBS7Q8IWZ6 715 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 ADGRG2Q8IZP9 1017 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 NUP93Q8N1F7 819 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 MED15Q96RN5 788 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 SRRTQ9BXP5 876 aaKnown RBP16.57■□□□□ 0.24
SKA2-209ENST00000583976 MMRN2Q9H8L6 949 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 ARHGEF4Q9NR80 690 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 EHD2Q9NZN4 543 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 DACH1Q9UI36 760 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 ZZEF1O43149 2961 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 TRIM24O15164 1050 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 MAPK13O15264 365 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 VNN1O95497 513 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 ADH1CP00326 375 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 APODP05090 189 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 TRIM49P0CI25 452 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 TRIM49CP0CI26 452 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 YWHAQP27348 245 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 KIR2DL1P43626 348 aaPredicted RBP16.56■□□□□ 0.24
SKA2-209ENST00000583976 SHC2P98077 582 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 ZNF252P-AS1Q0IIN9 211 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 SKOR2Q2VWA4 1001 aaPredicted RBP16.56■□□□□ 0.24
SKA2-209ENST00000583976 INTS8Q75QN2 995 aaKnown RBP16.56■□□□□ 0.24
SKA2-209ENST00000583976 ZC3H3Q8IXZ2 948 aaKnown RBP16.56■□□□□ 0.24
SKA2-209ENST00000583976 NAT16Q8N8M0 369 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 OLIG1Q8TAK6 271 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 TMC2Q8TDI7 906 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 ERLEC1Q96DZ1 483 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 PNKPQ96T60 521 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 MED10Q9BTT4 135 aa16.56■□□□□ 0.24
SKA2-209ENST00000583976 MBD1Q9UIS9 605 aaPredicted RBP16.56■□□□□ 0.24
SKA2-209ENST00000583976 MYH10P35580 1976 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 TCRBV21S2A2A0A5A6 115 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 SLC9A3R1O14745 358 aaPredicted RBP16.55■□□□□ 0.24
SKA2-209ENST00000583976 TNFRSF10BO14763 440 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 SLC16A3O15427 465 aaKnown RBP16.55■□□□□ 0.24
SKA2-209ENST00000583976 PHACTR2O75167 634 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 BEST1O76090 585 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 SPINK2P20155 84 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 PTGER3P43115 390 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 PPP3CCP48454 512 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 MRPS21P82921 87 aaKnown RBP16.55■□□□□ 0.24
SKA2-209ENST00000583976 NCOA4Q13772 614 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 STX1AQ16623 288 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 TPD52L1Q16890 204 aaPredicted RBP16.55■□□□□ 0.24
SKA2-209ENST00000583976 CCDC40Q4G0X9 1142 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 TCERG1LQ5VWI1 586 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 GPRIN1Q7Z2K8 1008 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 ETFBKMTQ8IXQ9 262 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 FUKQ8N0W3 1084 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 ZMIZ2Q8NF64 920 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 HMGB4Q8WW32 186 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 PIGKQ92643 395 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 CEP63Q96MT8 703 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 DMAP1Q9NPF5 467 aaPredicted RBP16.55■□□□□ 0.24
SKA2-209ENST00000583976 FSCN3Q9NQT6 498 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.55■□□□□ 0.247e-8■■■■■ 186.3
SKA2-209ENST00000583976 ANO10Q9NW15 660 aa16.55■□□□□ 0.24
SKA2-209ENST00000583976 BCCIPQ9P287 314 aaKnown RBP eCLIP16.55■□□□□ 0.24
SKA2-209ENST00000583976 CHORDC1Q9UHD1 332 aaPredicted RBP16.55■□□□□ 0.24
SKA2-209ENST00000583976 RALYQ9UKM9 306 aaKnown RBP16.55■□□□□ 0.24
SKA2-209ENST00000583976 MYO18AQ92614 2054 aaKnown RBP16.55■□□□□ 0.24
SKA2-209ENST00000583976 AKAP13Q12802 2813 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 SYCE3A1L190 88 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 CDX4O14627 284 aaPredicted RBP16.54■□□□□ 0.24
SKA2-209ENST00000583976 KHNYNO15037 678 aaKnown RBP16.54■□□□□ 0.24
SKA2-209ENST00000583976 AP1G2O75843 785 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 TOP3BO95985 862 aaKnown RBP16.54■□□□□ 0.24
SKA2-209ENST00000583976 ERCC5P28715 1186 aaPredicted RBP16.54■□□□□ 0.24
SKA2-209ENST00000583976 ATICP31939 592 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 EIF2DP41214 584 aaKnown RBP16.54■□□□□ 0.24
SKA2-209ENST00000583976 P2RY2P41231 377 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 IRX4P78413 519 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 TYRO3Q06418 890 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 FOXC1Q12948 553 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
SKA2-209ENST00000583976 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 C1orf220Q5T0J3 134 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 HECTD3Q5T447 861 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 SH3PXD2AQ5TCZ1 1133 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 SPOPLQ6IQ16 392 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 C11orf57Q6ZUT1 292 aaPredicted RBP16.54■□□□□ 0.24
SKA2-209ENST00000583976 ACOT1Q86TX2 421 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 DDX42Q86XP3 938 aaKnown RBP eCLIP16.54■□□□□ 0.24
SKA2-209ENST00000583976 MIB1Q86YT6 1006 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 TMEFF1Q8IYR6 380 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 PDZD8Q8NEN9 1154 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 CCDC26Q8TAB7 109 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 WHAMMQ8TF30 809 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms