RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 SMARCD2Q92925 531 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 AZIN2Q96A70 460 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 ASB2Q96Q27 587 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 SLC2A13Q96QE2 648 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 EIF3CQ99613 913 aaKnown RBP9.76□□□□□ -0.85
UBBP4-201ENST00000583708 DCLK3Q9C098 648 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 CYTH4Q9UIA0 394 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 STAP1Q9ULZ2 295 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 ARHGAP26Q9UNA1 814 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 ZNF510Q9Y2H8 683 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 PLXNA3P51805 1871 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 A0A087X0T9 212 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 A0A1W2PQH9 124 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 YJEFN3A6XGL0 299 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 E7ENQ6 273 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 SLC9A3R1O14745 358 aaPredicted RBP9.75□□□□□ -0.85
UBBP4-201ENST00000583708 CAPN9O14815 690 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 ARHGAP6O43182 974 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 GABBR2O75899 941 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 LATS1O95835 1130 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 CALCAP01258 141 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 FAM228BP0C875 321 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 KRT3P12035 628 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 RARGP13631 454 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 CCR2P41597 374 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 MATKP42679 507 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 RING1Q06587 406 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 CCDC173Q0VFZ6 552 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 GPR158Q5T848 1215 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 PLEKHA7Q6IQ23 1121 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 RSRC2Q7L4I2 434 aaKnown RBP9.75□□□□□ -0.85
UBBP4-201ENST00000583708 GPRIN1Q7Z2K8 1008 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 SCD5Q86SK9 330 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 UNC45BQ8IWX7 931 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 NPAS3Q8IXF0 933 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 TDRD5Q8NAT2 981 aaKnown RBP9.75□□□□□ -0.85
UBBP4-201ENST00000583708 ITFG1Q8TB96 612 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 FNIP1Q8TF40 1166 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 DEPDC1BQ8WUY9 529 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 CTNNBL1Q8WYA6 563 aaPredicted RBP9.75□□□□□ -0.85
UBBP4-201ENST00000583708 NT5C3BQ969T7 300 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 ELSPBP1Q96BH3 223 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 OTUB2Q96DC9 234 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 PGAP3Q96FM1 320 aaPredicted RBP9.75□□□□□ -0.85
UBBP4-201ENST00000583708 ASB16Q96NS5 453 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 CHP1Q99653 195 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 DDX23Q9BUQ8 820 aaKnown RBP9.75□□□□□ -0.85
UBBP4-201ENST00000583708 SELENOOQ9BVL4 669 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 SLC46A2Q9BY10 475 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 NACA2Q9H009 215 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 POMKQ9H5K3 350 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 ZFP14Q9HCL3 533 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 TDP1Q9NUW8 608 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 HCFC1R1Q9NWW0 138 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 THG1LQ9NWX6 298 aaKnown RBP9.75□□□□□ -0.85
UBBP4-201ENST00000583708 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.75□□□□□ -0.85
UBBP4-201ENST00000583708 GMIPQ9P107 970 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 UVRAGQ9P2Y5 699 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 NENFQ9UMX5 172 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 ATG2AQ2TAZ0 1938 aa9.75□□□□□ -0.85
UBBP4-201ENST00000583708 E2F8A0AVK6 867 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 LOC730098B7Z3J9 87 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 ANHXE9PGG2 379 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 DPYSL4O14531 572 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 DAB1O75553 588 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 ENDOD1O94919 500 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 NDUFA10O95299 355 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 ABL1P00519 1130 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 CYP1A2P05177 515 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 CKMP06732 381 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 TMEM253P0C7T8 217 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 GBP2P32456 591 aaPredicted RBP9.74□□□□□ -0.85
UBBP4-201ENST00000583708 PTPN9P43378 593 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 MLLT6P55198 1093 aaPredicted RBP9.74□□□□□ -0.85
UBBP4-201ENST00000583708 TEAD2Q15562 447 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 SLC5A9Q2M3M2 681 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 SLC25A52Q3SY17 297 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 C10orf120Q5SQS8 335 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 DNAJC24Q6P3W2 148 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 MMS22LQ6ZRQ5 1243 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 FAM183BPQ6ZVS7 135 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 BHLHA9Q7RTU4 235 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 ARID3BQ8IVW6 561 aaPredicted RBP9.74□□□□□ -0.85
UBBP4-201ENST00000583708 LRRC8AQ8IWT6 810 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 RHOT2Q8IXI1 618 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 MAB21L3Q8N8X9 362 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 SPC24Q8NBT2 197 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 OLIG1Q8TAK6 271 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 FAM149B1Q96BN6 582 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 PLD4Q96BZ4 506 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 TCEAL4Q96EI5 215 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 SERPINB11Q96P15 392 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 PPP1R9BQ96SB3 815 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 DDX50Q9BQ39 737 aaKnown RBP9.74□□□□□ -0.85
UBBP4-201ENST00000583708 SMOC2Q9H3U7 446 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 SLITRK6Q9H5Y7 841 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 NMUR1Q9HB89 426 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 TRPV5Q9NQA5 729 aa9.74□□□□□ -0.85
UBBP4-201ENST00000583708 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.74□□□□□ -0.85
UBBP4-201ENST00000583708 MARCH2Q9P0N8 246 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms