RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 SNX12Q9UMY4 172 aa18.98■□□□□ 0.63
NDEL1-217ENST00000583683 TCF4P15884 667 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 HMGA1P17096 107 aaKnown RBP18.97■□□□□ 0.63
NDEL1-217ENST00000583683 CTNNA1P35221 906 aaKnown RBP18.97■□□□□ 0.63
NDEL1-217ENST00000583683 DNA2P51530 1060 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 TAS2R40P59535 323 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 TAF10Q12962 218 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 CDO1Q16878 200 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 SLC25A52Q3SY17 297 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 BEND5Q7L4P6 421 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 EDEM1Q92611 657 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 KRT35Q92764 455 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 FBXO32Q969P5 355 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 GMIPQ9P107 970 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 MAGED2Q9UNF1 606 aaPredicted RBP18.97■□□□□ 0.63
NDEL1-217ENST00000583683 MYO9BQ13459 2157 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 A0A1W2PQH9 124 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 MIF4GDA9UHW6 222 aaKnown RBP18.97■□□□□ 0.63
NDEL1-217ENST00000583683 CAPN9O14815 690 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 DDX3YO15523 660 aaKnown RBP18.97■□□□□ 0.63
NDEL1-217ENST00000583683 RNF8O76064 485 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 C1RP00736 705 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 CSH1P0DML2 217 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 CSH2P0DML3 217 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 NCAM1P13591 858 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 MARCKSL1P49006 195 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 PITX1P78337 314 aaPredicted RBP18.97■□□□□ 0.63
NDEL1-217ENST00000583683 RAB6CQ53S08 254 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 FAM172AQ8WUF8 416 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 CENPIQ92674 756 aaPredicted RBP18.97■□□□□ 0.63
NDEL1-217ENST00000583683 MYRFLQ96LU7 910 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 PSMB7Q99436 277 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 NPY6RQ99463 290 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 TRIM62Q9BVG3 475 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 RAB6CQ9H0N0 254 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 ABCC13Q9NSE7 274 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 OSER1Q9NX31 292 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 CALCOCO1Q9P1Z2 691 aa18.97■□□□□ 0.63
NDEL1-217ENST00000583683 CLASP2O75122 1294 aaKnown RBP18.96■□□□□ 0.63
NDEL1-217ENST00000583683 C8AP07357 584 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 PRLRP16471 622 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 EPHB3P54753 998 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 MLLT1Q03111 559 aaPredicted RBP18.96■□□□□ 0.63
NDEL1-217ENST00000583683 VEPH1Q14D04 833 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 OTUD1Q5VV17 481 aaPredicted RBP18.96■□□□□ 0.63
NDEL1-217ENST00000583683 CCDC149Q6ZUS6 474 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 BNIPLQ7Z465 357 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 ALG3Q92685 438 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 TBCBQ99426 244 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 EHD2Q9NZN4 543 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 STAP1Q9ULZ2 295 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 PCDHA3Q9Y5H8 950 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 SAR1BQ9Y6B6 198 aa18.96■□□□□ 0.63
NDEL1-217ENST00000583683 CCDC66A2RUB6 948 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 RFXAPO00287 272 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 PER2O15055 1255 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 SRGAP2O75044 1071 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 URI1O94763 535 aaPredicted RBP18.95■□□□□ 0.62
NDEL1-217ENST00000583683 CTNNA2P26232 953 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 CXCR5P32302 372 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 GTF2F1P35269 517 aaKnown RBP eCLIP18.95■□□□□ 0.62
NDEL1-217ENST00000583683 PCK1P35558 622 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 PEX5P50542 639 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 HDAC4P56524 1084 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 ADGRD2Q7Z7M1 963 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 ARHGAP18Q8N392 663 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 SLC22A17Q8WUG5 538 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 PSMG2Q969U7 264 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 TRMT2BQ96GJ1 504 aaKnown RBP18.95■□□□□ 0.62
NDEL1-217ENST00000583683 SLITRK1Q96PX8 696 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 OSBPL9Q96SU4 736 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 ZDHHC11BP0C7U3 371 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 MIPP30301 263 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 SSR1P43307 286 aaKnown RBP18.95■□□□□ 0.62
NDEL1-217ENST00000583683 SULT1E1P49888 294 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 SLC25A11Q02978 314 aaKnown RBP18.95■□□□□ 0.62
NDEL1-217ENST00000583683 PLD1Q13393 1074 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 BTBD8Q5XKL5 378 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 STRADAQ7RTN6 431 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 DNAJB7Q7Z6W7 309 aaPredicted RBP18.95■□□□□ 0.62
NDEL1-217ENST00000583683 RHOT1Q8IXI2 618 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 UBL4BQ8N7F7 174 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 TLR8Q9NR97 1041 aaKnown RBP18.95■□□□□ 0.62
NDEL1-217ENST00000583683 REV3LO60673 3130 aa18.95■□□□□ 0.62
NDEL1-217ENST00000583683 M0QYT0 321 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 KCNK3O14649 394 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 PSTPIP1O43586 416 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 ENDOD1O94919 500 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 EPCAMP16422 314 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 DESP17661 470 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 IL1R2P27930 398 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 PSEN1P49768 467 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 ATXN1P54253 815 aaKnown RBP18.94■□□□□ 0.62
NDEL1-217ENST00000583683 DCAF12L1Q5VU92 463 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 TXNRD3NBQ6F5E7 133 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 RBM23Q86U06 439 aaKnown RBP18.94■□□□□ 0.62
NDEL1-217ENST00000583683 PLEKHA4Q9H4M7 779 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 MAN1C1Q9NR34 630 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 RRN3Q9NYV6 651 aa18.94■□□□□ 0.62
NDEL1-217ENST00000583683 USP18Q9UMW8 372 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms