RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 TAF11Q15544 211 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 TRIM60Q495X7 471 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 LRRC24Q50LG9 513 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 FAM69AQ5T7M9 428 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 MFSD5Q6N075 450 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 ZNF585AQ6P3V2 769 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 SLC30A10Q6XR72 485 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 RASGRP2Q7LDG7 609 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 PPP1R32Q7Z5V6 425 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 CPLX4Q7Z7G2 160 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 XYLT1Q86Y38 959 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 ARMC8Q8IUR7 673 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 PDPRQ8NCN5 879 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 NSUN7Q8NE18 718 aaKnown RBP5.4□□□□□ -1.54
SS18-223ENST00000583595 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 SMCR8Q8TEV9 937 aaPredicted RBP5.4□□□□□ -1.54
SS18-223ENST00000583595 SLC7A6OSQ96CW6 309 aaPredicted RBP5.4□□□□□ -1.54
SS18-223ENST00000583595 RADILQ96JH8 1075 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 SLC46A1Q96NT5 459 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 GNRHR2Q96P88 292 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 LRRC37BQ96QE4 947 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 LMF1Q96S06 567 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 MECRQ9BV79 373 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 SLC46A2Q9BY10 475 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 KLC2Q9H0B6 622 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 DEF6Q9H4E7 631 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 EIF2B3Q9NR50 452 aaKnown RBP5.4□□□□□ -1.54
SS18-223ENST00000583595 SEPT11Q9NVA2 429 aaKnown RBP5.4□□□□□ -1.54
SS18-223ENST00000583595 HESX1Q9UBX0 185 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 PCDHGB4Q9UN71 923 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 CAMK2AQ9UQM7 478 aa5.4□□□□□ -1.54
SS18-223ENST00000583595 MRPS17Q9Y2R5 130 aaKnown RBP5.4□□□□□ -1.54
SS18-223ENST00000583595 hCG_1807616A0A1W2PRN6 198 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 CDHR4A6H8M9 788 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 AQP7P3A6NL99 342 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 KIF28PB7ZC32 967 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 KIAA0355O15063 1070 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 DHHO43323 396 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 ZNF623O75123 536 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 GJB3O75712 270 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 RPP40O75818 363 aaKnown RBP5.39□□□□□ -1.55
SS18-223ENST00000583595 PRSS23O95084 383 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 SGPL1O95470 568 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 CER1O95813 267 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 TPM2P07951 284 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 CYP2C9P11712 490 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 TNFRSF1AP19438 455 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 CHRM3P20309 590 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 TGM1P22735 817 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 NTSR1P30989 418 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 GGT5P36269 586 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 VIPR2P41587 438 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 CLRN1P58418 232 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 ADAM8P78325 824 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 RPP30P78346 268 aaKnown RBP5.39□□□□□ -1.55
SS18-223ENST00000583595 KRT17Q04695 432 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 MRPL49Q13405 166 aaKnown RBP5.39□□□□□ -1.55
SS18-223ENST00000583595 EIF4A2Q14240 407 aaKnown RBP5.39□□□□□ -1.55
SS18-223ENST00000583595 BECN1Q14457 450 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 IQCB1Q15051 598 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 PLCB4Q15147 1175 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 GPR68Q15743 365 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 TBCEQ15813 527 aaPredicted RBP5.39□□□□□ -1.55
SS18-223ENST00000583595 TBR1Q16650 682 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 ZNF568Q3ZCX4 644 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 CTXN3Q4LDR2 81 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 ZNF484Q5JVG2 852 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 ABLIM2Q6H8Q1 611 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 SLC22A25Q6T423 547 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 DIS3L2Q8IYB7 885 aaKnown RBP5.39□□□□□ -1.55
SS18-223ENST00000583595 CCDC191Q8NCU4 936 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 HMGB4Q8WW32 186 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 WWC2-AS2Q96NR7 200 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 GPHA2Q96T91 129 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 SLF1Q9BQI6 1058 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 ITPAQ9BY32 194 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 SLC6A15Q9H2J7 730 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 CDY1Q9Y6F8 540 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 MRC2Q9UBG0 1479 aa5.39□□□□□ -1.55
SS18-223ENST00000583595 TBKBP1A7MCY6 615 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 EFCAB8A8MWE9 144 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 MASP2O00187 686 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 MATN3O15232 486 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 STC2O76061 302 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 ADRB2P07550 413 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 RGS2P41220 211 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 LILRA4P59901 499 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 GPS1Q13098 491 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 CDSNQ15517 529 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 TBCCQ15814 346 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 NFIL3Q16649 462 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 ZKSCAN2Q63HK3 967 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 TCTN3Q6NUS6 607 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 GET4Q7L5D6 327 aaPredicted RBP5.38□□□□□ -1.55
SS18-223ENST00000583595 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.38□□□□□ -1.55
SS18-223ENST00000583595 FITM2Q8N6M3 262 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 LINS1Q8NG48 757 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 OR14K1Q8NGZ2 314 aa5.38□□□□□ -1.55
SS18-223ENST00000583595 Q8TCH9 128 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms