RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 ANO9A1A5B4 782 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 AKR1B10O60218 316 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 PRAMEF12O95522 483 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 KRT19P08727 400 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 OR4Q2P0C623 313 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 CPB1P15086 417 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 ACO1P21399 889 aaKnown RBP18.9■□□□□ 0.62
SNX11-212ENST00000583320 POLR2BP30876 1174 aaKnown RBP18.9■□□□□ 0.62
SNX11-212ENST00000583320 KIF11P52732 1056 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 BPIFB4P59827 614 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 ZNF252P-AS1Q0IIN9 211 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 MYO1EQ12965 1108 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 SPOPLQ6IQ16 392 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 TOGARAM2Q6ZUX3 1019 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 TTC39CQ8N584 583 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 UBR7Q8N806 425 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 CHFRQ96EP1 664 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 HPDLQ96IR7 371 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 EDEM2Q9BV94 578 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 HAUS4Q9H6D7 363 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 CYP3A43Q9HB55 503 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 AGAP1Q9UPQ3 857 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 PPP2R2CQ9Y2T4 447 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 PCDHGA5Q9Y5G8 931 aa18.9■□□□□ 0.62
SNX11-212ENST00000583320 PLEKP08567 350 aaPredicted RBP18.89■□□□□ 0.61
SNX11-212ENST00000583320 PNPLA4P41247 253 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 ARID5AQ03989 594 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 PTK2Q05397 1052 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 SPA17Q15506 151 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 PLK5Q496M5 336 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 C9orf57Q5W0N0 161 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 ZNF662Q6ZS27 426 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 GAREM2Q75VX8 874 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 SYNPOQ8N3V7 929 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 PGLYRP2Q96PD5 576 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 SYT11Q9BT88 431 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 VPS45Q9NRW7 570 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 IGSF10Q6WRI0 2623 aa18.89■□□□□ 0.61
SNX11-212ENST00000583320 C4orf47A7E2U8 309 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 PIRO00625 290 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 ASPAP45381 313 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 SLC18A3Q16572 532 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 C10orf76Q5T2E6 689 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 FSTL4Q6MZW2 842 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 ZNF571Q7Z3V5 609 aaPredicted RBP18.88■□□□□ 0.61
SNX11-212ENST00000583320 TXLNBQ8N3L3 684 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 GATA6Q92908 595 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 ZC3H10Q96K80 434 aaKnown RBP18.88■□□□□ 0.61
SNX11-212ENST00000583320 ZNF560Q96MR9 790 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 ADAM33Q9BZ11 813 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 DUSP15Q9H1R2 295 aaPredicted RBP18.88■□□□□ 0.61
SNX11-212ENST00000583320 LUC7LQ9NQ29 371 aaKnown RBP18.88■□□□□ 0.61
SNX11-212ENST00000583320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.88■□□□□ 0.613e-10■■■■■ 153.8
SNX11-212ENST00000583320 TUBGCP4Q9UGJ1 667 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 ATP8B3O60423 1300 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 FREM2Q5SZK8 3169 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 SCN1AP35498 2009 aa18.88■□□□□ 0.61
SNX11-212ENST00000583320 LAMA5O15230 3695 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 CCDC163A0A0D9SF12 145 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 SRRM3A6NNA2 597 aaPredicted RBP18.87■□□□□ 0.61
SNX11-212ENST00000583320 DCLK1O15075 740 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 SOAT2O75908 522 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 PNMA6AP0CW24 399 aaPredicted RBP18.87■□□□□ 0.61
SNX11-212ENST00000583320 PAX3P23760 479 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 RPL9P32969 192 aaKnown RBP18.87■□□□□ 0.61
SNX11-212ENST00000583320 CLCN1P35523 988 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 GUCY2FP51841 1108 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 WDR72Q3MJ13 1102 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 ARHGAP29Q52LW3 1261 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 SCARA3Q6AZY7 606 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 ZNF677Q86XU0 584 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 TTC9BQ8N6N2 239 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 ARID3AQ99856 593 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 SMG9Q9H0W8 520 aaKnown RBP18.87■□□□□ 0.61
SNX11-212ENST00000583320 MAFFQ9ULX9 164 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 PCDHB4Q9Y5E5 795 aa18.87■□□□□ 0.61
SNX11-212ENST00000583320 TIMM13Q9Y5L4 95 aaPredicted RBP18.87■□□□□ 0.61
SNX11-212ENST00000583320 CYP26A1O43174 497 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 CLSTN1O94985 981 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 FAM163BP0C2L3 166 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 USP8P40818 1118 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 ZNF132P52740 706 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 DUSP4Q13115 394 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 SH3PXD2AQ5TCZ1 1133 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 REXO1L1PQ8IX06 675 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 EPS8L1Q8TE68 723 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 PPP1R13BQ96KQ4 1090 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 HHIPQ96QV1 700 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 TMEM209Q96SK2 561 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 DESI2Q9BSY9 194 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 GDAP2Q9NXN4 497 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 NENFQ9UMX5 172 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 PCDHB8Q9UN66 801 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 SLC27A5Q9Y2P5 690 aa18.86■□□□□ 0.61
SNX11-212ENST00000583320 REXO2Q9Y3B8 237 aaKnown RBP18.86■□□□□ 0.61
SNX11-212ENST00000583320 SMG1Q96Q15 3661 aaKnown RBP18.86■□□□□ 0.61
SNX11-212ENST00000583320 LNP1A1A4G5 178 aa18.85■□□□□ 0.61
SNX11-212ENST00000583320 OTOL1A6NHN0 477 aaPredicted RBP18.85■□□□□ 0.61
SNX11-212ENST00000583320 TUBB4AP04350 444 aa18.85■□□□□ 0.61
SNX11-212ENST00000583320 KRT5P13647 590 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms