RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CFHR3Q02985 330 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 LAMB3Q13751 1172 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 CLEC9AQ6UXN8 241 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 RANBP10Q6VN20 620 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 KRT73Q86Y46 540 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 C12orf76Q8N812 135 aaPredicted RBP4.86□□□□□ -1.63
COPS3-217ENST00000583160 MAP4K1Q92918 833 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 CUL5Q93034 780 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 TSR2Q969E8 191 aaKnown RBP4.86□□□□□ -1.63
COPS3-217ENST00000583160 COQ8BQ96D53 544 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 HMCESQ96FZ2 354 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 MSLNLQ96KJ4 702 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 DNAJB11Q9UBS4 358 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 STEAP1Q9UHE8 339 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 AFG3L2Q9Y4W6 797 aa4.86□□□□□ -1.63
COPS3-217ENST00000583160 A8MVJ9 347 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 PROB1E7EW31 1015 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 CLIC1O00299 241 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 ADAM10O14672 748 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 SNX2O60749 519 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 MT-ND5P03915 603 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 HOXD9P28356 352 aaPredicted RBP4.85□□□□□ -1.63
COPS3-217ENST00000583160 SEMA5AQ13591 1074 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 KCNB1Q14721 858 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 MFSD13AQ14CX5 517 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 MANEALQ5VSG8 457 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 SHC4Q6S5L8 630 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 VSTM1Q6UX27 236 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 MRPL10Q7Z7H8 261 aaKnown RBP4.85□□□□□ -1.63
COPS3-217ENST00000583160 C14orf80Q86SX3 495 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 LIX1LQ8IVB5 337 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 SDR16C5Q8N3Y7 309 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 C16orf52Q8NHV5 167 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.85□□□□□ -1.63
COPS3-217ENST00000583160 TTC8Q8TAM2 541 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 PIGOQ8TEQ8 1089 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 EDC3Q96F86 508 aaKnown RBP4.85□□□□□ -1.63
COPS3-217ENST00000583160 SNX22Q96L94 193 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 WDR26Q9H7D7 661 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 TBC1D23Q9NUY8 699 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 OBP2AQ9NY56 170 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 PI4KBQ9UBF8 816 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 CAPN11Q9UMQ6 739 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 SLC27A6Q9Y2P4 619 aa4.85□□□□□ -1.63
COPS3-217ENST00000583160 NISCHQ9Y2I1 1504 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 RHCEP18577 417 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 RPL17P18621 184 aaKnown RBP4.84□□□□□ -1.63
COPS3-217ENST00000583160 ADRA1DP25100 572 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 CCT4P50991 539 aaKnown RBP4.84□□□□□ -1.63
COPS3-217ENST00000583160 RHDQ02161 417 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 RBMS2Q15434 407 aaKnown RBP4.84□□□□□ -1.63
COPS3-217ENST00000583160 SEC23BQ15437 767 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 ST3GAL2Q16842 350 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 TMTC4Q5T4D3 741 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 MZT2AQ6P582 158 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 C16orf71Q8IYS4 520 aaPredicted RBP4.84□□□□□ -1.63
COPS3-217ENST00000583160 PNPLA1Q8N8W4 532 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 KAZALD1Q96I82 304 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 VPS50Q96JG6 964 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 SIGLEC11Q96RL6 698 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 STRBPQ96SI9 672 aaKnown RBP4.84□□□□□ -1.63
COPS3-217ENST00000583160 USP29Q9HBJ7 922 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 PRDM11Q9NQV5 511 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 ZNF212Q9UDV6 495 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 VPS51Q9UID3 782 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 MAFFQ9ULX9 164 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 HPSEQ9Y251 543 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 PCDHGB6Q9Y5F9 930 aa4.84□□□□□ -1.63
COPS3-217ENST00000583160 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.83□□□□□ -1.64
COPS3-217ENST00000583160 KRTAP29-1A8MX34 341 aaPredicted RBP4.83□□□□□ -1.64
COPS3-217ENST00000583160 F8W8V4 182 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 SOCS2O14508 198 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 FYB1O15117 783 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 EIF4A1P60842 406 aaKnown RBP4.83□□□□□ -1.64
COPS3-217ENST00000583160 GPC5P78333 572 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 ZNF91Q05481 1191 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 MAPK7Q13164 816 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 GALEQ14376 348 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 ZNF260Q3ZCT1 412 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 CC2D1BQ5T0F9 858 aaKnown RBP4.83□□□□□ -1.64
COPS3-217ENST00000583160 C10orf25Q5T742 122 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 AWAT2Q6E213 333 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 TECPR1Q7Z6L1 1165 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 NRACQ8N912 160 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 FAM71DQ8N9W8 422 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 ZDHHC12Q96GR4 267 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 BTBD1Q9H0C5 482 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 ZCWPW1Q9H0M4 648 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 MTMR4Q9NYA4 1195 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 FZD4Q9ULV1 537 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 SNX13Q9Y5W8 968 aa4.83□□□□□ -1.64
COPS3-217ENST00000583160 CA12O43570 354 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 TMEM225BP0DP42 221 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 YY1P25490 414 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 RBL1P28749 1068 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 COPAP53621 1224 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 HTRA4P83105 476 aaPredicted RBP4.82□□□□□ -1.64
COPS3-217ENST00000583160 TXNL4AP83876 142 aaKnown RBP4.82□□□□□ -1.64
COPS3-217ENST00000583160 SLC14A1Q13336 389 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms