RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 LMO3Q8TAP4 145 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PLEKHO2Q8TD55 490 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 BPIFB1Q8TDL5 484 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TAS1R2Q8TE23 839 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ZNF516Q92618 1163 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ACDQ96AP0 544 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ZMAT2Q96NC0 199 aaKnown RBP9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PANX2Q96RD6 677 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 AGAP1Q9UPQ3 857 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 AKR1B15C9JRZ8 316 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 I3L4J1 428 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TULP1O00294 542 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PODXLO00592 558 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TRDMT1O14717 391 aaKnown RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 GFPT2O94808 682 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CLSTN1O94985 981 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 FERP16591 822 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TYMPP19971 482 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 DRD1P21728 446 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 WEE1P30291 646 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 POLR2BP30876 1174 aaKnown RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 HNRNPH3P31942 346 aaKnown RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 DPP6P42658 865 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 BRCC3P46736 316 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 AARSP49588 968 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ARPP19P56211 112 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 LILRA4P59901 499 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 AMPD2Q01433 879 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TNK2Q07912 1038 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 KCNMA1Q12791 1236 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CUL2Q13617 745 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 MRPL58Q14197 206 aaKnown RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 MEA1Q16626 185 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 WDR72Q3MJ13 1102 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 USP39Q53GS9 565 aaKnown RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TRIM61Q5EBN2 209 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ZNF280DQ6N043 979 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CD300LGQ6UXG3 332 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ZNF677Q86XU0 584 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 THEM5Q8N1Q8 247 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PPM1KQ8N3J5 372 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 C3orf58Q8NDZ4 430 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ZSWIM2Q8NEG5 633 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 OR8K1Q8NGG5 319 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CXorf38Q8TB03 319 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 EXOC4Q96A65 974 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 LRIG1Q96JA1 1093 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PDLIM2Q96JY6 352 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TNIP3Q96KP6 325 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 UBL7Q96S82 380 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 LRRC3Q9BY71 257 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 XYLT2Q9H1B5 865 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 LUC7LQ9NQ29 371 aaKnown RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 FAM207AQ9NSI2 230 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 THG1LQ9NWX6 298 aaKnown RBP9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 YIPF1Q9Y548 306 aa9.25□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SCN1AP35498 2009 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 URB1O60287 2271 aaKnown RBP9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 M0QZQ0 153 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TK2O00142 265 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TEX33O43247 280 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 MED7O43513 233 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 IPO7O95373 1038 aaKnown RBP9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 VNN1O95497 513 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 FGF19O95750 216 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CST3P01034 146 aaPredicted RBP9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CYP11A1P05108 521 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PAEPP09466 180 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ENGP17813 658 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SLC9A1P19634 815 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PCSK1P29120 753 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 MAPK8P45983 427 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 DGKEP52429 567 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SNX16P57768 344 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 MYL6P60660 151 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 POLR2FP61218 127 aaKnown RBP9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PTK2Q05397 1052 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 INCA1Q0VD86 236 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TBX2Q13207 712 aaPredicted RBP9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 DMC1Q14565 340 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 HS1BP3Q53T59 392 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 GLRA4Q5JXX5 417 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 STXBP5Q5T5C0 1151 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SFMBT2Q5VUG0 894 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 DSTYKQ6XUX3 929 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TMC6Q7Z403 805 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 HDDC3Q8N4P3 179 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 RPLP0P6Q8NHW5 317 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 HNRNPLLQ8WVV9 542 aaKnown RBP9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ADAMTS14Q8WXS8 1223 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PIGKQ92643 395 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SUSD3Q96L08 255 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 LRRC3BQ96PB8 259 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PPP1R9BQ96SB3 815 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CRACR2AQ9BSW2 395 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TTYH3Q9C0H2 523 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CXCL16Q9H2A7 254 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 UBE2TQ9NPD8 197 aaPredicted RBP9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 AIPL1Q9NZN9 384 aa9.24□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TUBGCP4Q9UGJ1 667 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms