RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 FOXP1Q9H334 677 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 OSGEPQ9NPF4 335 aa9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ITM2CQ9NQX7 267 aa9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 DNAJC17Q9NVM6 304 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 GDAP2Q9NXN4 497 aa9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 WDR35Q9P2L0 1181 aa9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 AGO2Q9UKV8 859 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CDH9Q9ULB4 789 aa9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 L1RE1Q9UN81 338 aa9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 R3HCC1Q9Y3T6 440 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-224ENST00000582275 A0A1B0GVT2 93 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 K7ENM7 598 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 PAPSS1O43252 624 aaPredicted RBP9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CACNG3O60359 315 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 C6P13671 934 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 PRPHP41219 470 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 GRIA4P48058 902 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ACOT2P49753 483 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CXADRP78310 365 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TLE3Q04726 772 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 RAD51AP2Q09MP3 1159 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 GNL2Q13823 731 aaKnown RBP9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 PKDCCQ504Y2 493 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SMYD5Q6GMV2 418 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ADGRD1Q6QNK2 874 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 MIB1Q86YT6 1006 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 OVCA2Q8WZ82 227 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TMEM176AQ96HP8 235 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 C8orf48Q96LL4 319 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 HNRNPABQ99729 332 aaKnown RBP9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.31□□□□□ -0.922e-7■■■□□ 19.2
CDK5RAP3-224ENST00000582275 EIF2B4Q9UI10 523 aaKnown RBP9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 BTBD3Q9Y2F9 522 aa9.31□□□□□ -0.92
CDK5RAP3-224ENST00000582275 MUC22E2RYF6 1773 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SCAMP3O14828 347 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 RFPL3O75679 317 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 FAM13AO94988 1023 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 IGLV3-19P01714 112 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ACADMP11310 421 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 BDNFP23560 247 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 POLR2BP30876 1174 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CSRP3P50461 194 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TUBP50607 506 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SLC12A3P55017 1021 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TMPRSS3P57727 454 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 RBP5P82980 135 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TFAMQ00059 246 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 BNC1Q01954 994 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TAF10Q12962 218 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 MYO1EQ12965 1108 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 KIF19Q2TAC6 998 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 HYIQ5T013 277 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 DTHD1Q6ZMT9 781 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 KCNK18Q7Z418 384 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CACTIN-AS1Q8N1I8 211 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 MYCT1Q8N699 235 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 C4orf32Q8N8J7 132 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 NSUN7Q8NE18 718 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 PRCCQ92733 491 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 GTF3C6Q969F1 213 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 MYLPFQ96A32 169 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SIPA1Q96FS4 1042 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CDK5RAP3Q96JB5 506 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ACOX2Q99424 681 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ARID3AQ99856 593 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SYT15Q9BQS2 421 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SLC4A5Q9BY07 1137 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 PARVGQ9HBI0 331 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 DNMT3LQ9UJW3 386 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ITGA11Q9UKX5 1188 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 AGAP1Q9UPQ3 857 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ANKRD6Q9Y2G4 727 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SNX9Q9Y5X1 595 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 STYXL1Q9Y6J8 313 aa9.3□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CFAP46Q8IYW2 2715 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ENC1O14682 589 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SLC26A4O43511 780 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SLC28A2O43868 658 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TRAK2O60296 914 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 SYNCRIPO60506 623 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 RTN3O95197 1032 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ITGB3P05106 788 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 PLA2G4BP0C869 781 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 DGKGP49619 791 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CSNK1EP49674 416 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TPMTP51580 245 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 USP46P62068 366 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 CYP27A1Q02318 531 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 GOLGA8FQ08AF8 430 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 GOLGA8DPQ0D2H9 430 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 KCNH2Q12809 1159 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TARDBPQ13148 414 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ILKQ13418 452 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 ZRSR1Q15695 479 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TBC1D25Q3MII6 688 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 FUT11Q495W5 492 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 HECTD3Q5T447 861 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 PCSK4Q6UW60 755 aa9.29□□□□□ -0.92
CDK5RAP3-224ENST00000582275 TMEM25Q86YD3 366 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms