RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 ITGA11Q9UKX5 1188 aa14.73□□□□□ -0.05
CSNK1D-219ENST00000581660 SNX11Q9Y5W9 270 aa14.73□□□□□ -0.05
CSNK1D-219ENST00000581660 TEX15Q9BXT5 2789 aa14.73□□□□□ -0.05
CSNK1D-219ENST00000581660 TMEM131Q92545 1883 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 B8ZZF3 427 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 F8VP50 259 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 COCHO43405 550 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 TRAK2O60296 914 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 ABL1P00519 1130 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 JUPP14923 745 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 PLCG1P19174 1290 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 CSNK1EP49674 416 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 TOB1P50616 345 aaPredicted RBP14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 CCT8P50990 548 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 TPMTP51580 245 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 WNT7BP56706 349 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 PSMC1P62191 440 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 TFAMQ00059 246 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 RHDQ02161 417 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 SF3A1Q15459 793 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 INAVAQ3KP66 663 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 TMEM119Q4V9L6 283 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 CCDC157Q569K6 752 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 TDRD10Q5VZ19 366 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 SCARA3Q6AZY7 606 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 DTHD1Q6ZMT9 781 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 MYCT1Q8N699 235 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 FAM181AQ8N9Y4 354 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 PDZD8Q8NEN9 1154 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 OVCA2Q8WZ82 227 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 FGF11Q92914 225 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 PCED1BQ96HM7 432 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 C8orf76Q96K31 380 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 XPO6Q96QU8 1125 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 HNRNPABQ99729 332 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 FTSJ1Q9UET6 329 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 SH3BP1Q9Y3L3 701 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 AK5Q9Y6K8 562 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 COL12A1Q99715 3063 aa14.72□□□□□ -0.05
CSNK1D-219ENST00000581660 WASH3PC4AMC7 463 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 WISP1O95388 367 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 C1SP09871 688 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 LMO2P25791 158 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 ADSSP30520 456 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 GRIA4P48058 902 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 TUBP50607 506 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 CXADRP78310 365 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 ST3GAL1Q11201 340 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 ENPP2Q13822 863 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 STARD3Q14849 445 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 ZRSR1Q15695 479 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 PKDCCQ504Y2 493 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 TAF1BQ53T94 588 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 SNX30Q5VWJ9 437 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 BRSK2Q8IWQ3 736 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 MYCBPAPQ8TBZ2 947 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 CACTINQ8WUQ7 758 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 TMEM176AQ96HP8 235 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 NUP58Q9BVL2 599 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 ST6GALNAC4Q9H4F1 302 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 WDR35Q9P2L0 1181 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 SIX4Q9UIU6 781 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 ANKRD6Q9Y2G4 727 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 SLCO1B1Q9Y6L6 691 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 STON1Q9Y6Q2 735 aa14.71□□□□□ -0.05
CSNK1D-219ENST00000581660 NPC1O15118 1278 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 GREM1O60565 184 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 FAM13AO94988 1023 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 CENPBP07199 599 aaPredicted RBP14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 CISD3P0C7P0 127 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 TYRP14679 529 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 IL12RB1P42701 662 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 RBP5P82980 135 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 CYP27A1Q02318 531 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 TEAD4Q15561 434 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 HECTD3Q5T447 861 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 FMNL3Q8IVF7 1028 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 SPACA3Q8IXA5 215 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 FBXO18Q8NFZ0 1043 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 WBP2Q969T9 261 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 TMEM30AQ9NV96 361 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 CKAP5Q14008 2032 aa14.7□□□□□ -0.06
CSNK1D-219ENST00000581660 NEDD8-MDP1E9PL57 170 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 H0Y8X5 98 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 RFPL3O75679 317 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 C6P13671 934 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 WARSP23381 471 aaKnown RBP14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 YWHAQP27348 245 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 CACNA2D1P54289 1103 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 TARDBPQ13148 414 aaKnown RBP eCLIP14.69□□□□□ -0.063e-6■■■■□ 20.8
CSNK1D-219ENST00000581660 ORC1Q13415 861 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 POSTNQ15063 836 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 HTR3DQ70Z44 454 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 GPBP1Q86WP2 473 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 ERICH1Q86X53 443 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 TMPRSS6Q8IU80 811 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 CACTIN-AS1Q8N1I8 211 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 CSGALNACT2Q8N6G5 542 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 POMGNT1Q8WZA1 660 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 SIPA1Q96FS4 1042 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms