RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SERPINF1P36955 418 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 PPM1FP49593 454 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 NXPH1P58417 271 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 NSUN2Q08J23 767 aaKnown RBP eCLIP5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 GPS1Q13098 491 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 SLC5A9Q2M3M2 681 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 COLEC12Q5KU26 742 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 TREML2Q5T2D2 321 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 ARL6IP4Q66PJ3 421 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 CLEC9AQ6UXN8 241 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 MAVSQ7Z434 540 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 DTX2Q86UW9 622 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 C11orf44Q8N8P7 122 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 FAM71BQ8TC56 605 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 FKBP10Q96AY3 582 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 GRAMD1AQ96CP6 724 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 ZNF668Q96K58 619 aaPredicted RBP5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 SORBS1Q9BX66 1292 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 GLOD4Q9HC38 313 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 AGO4Q9HCK5 861 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 FOXJ2Q9P0K8 574 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 DRG1Q9Y295 367 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 LRRC3CA6NJW4 275 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 VWC2LB2RUY7 222 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 SYT5O00445 386 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 ACKR2O00590 384 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 PROM1O43490 865 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 ASNA1O43681 348 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 TLR5O60602 858 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 FESP07332 822 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 CHRM2P08172 466 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 LIPAP38571 399 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 MTHFSP49914 203 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 CLCN2P51788 898 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 ABLIM2Q6H8Q1 611 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 CAND1Q86VP6 1230 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 SPATA5Q8NB90 893 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 ABHD5Q8WTS1 349 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 SMG7Q92540 1137 aaKnown RBP5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 R3HDM4Q96D70 268 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 ZDHHC12Q96GR4 267 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 PGBD1Q96JS3 809 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 PDLIM2Q96JY6 352 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 UROC1Q96N76 676 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 PAGR1Q9BTK6 254 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 LUZP4Q9P127 313 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 RNF7Q9UBF6 113 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 VPS51Q9UID3 782 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 FRMD4BQ9Y2L6 1034 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 ADGRA2Q96PE1 1338 aa5.47□□□□□ -1.53
SMCHD1-205ENST00000581383 SLC16A3O15427 465 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 ZSCAN9O15535 394 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 VIPP01282 170 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 NPPBP16860 134 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 SLC5A2P31639 672 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 TIAL1Q01085 375 aaKnown RBP eCLIP5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 FHL3Q13643 280 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 LDHAL6AQ6ZMR3 332 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 GATAD2AQ86YP4 633 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 RASGRP3Q8IV61 690 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 CPXCR1Q8N123 301 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 FSTL5Q8N475 847 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 METTL25Q8N6Q8 603 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 FAM98AQ8NCA5 519 aaKnown RBP5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 XAGE5Q8WWM1 108 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 TBC1D20Q96BZ9 403 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 HAPLN3Q96S86 360 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 VN1R3Q9BXE9 311 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 INO80BQ9C086 356 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 TMEM8AQ9HCN3 771 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 KLC4Q9NSK0 619 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 SLC27A6Q9Y2P4 619 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 DTNAQ9Y4J8 743 aa5.46□□□□□ -1.54
SMCHD1-205ENST00000581383 EXOC5O00471 708 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 FCHO1O14526 889 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 MPPED1O15442 326 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 IL6RP08887 468 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 RBL1P28749 1068 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 RENBPP51606 427 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 TIRAPP58753 221 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 ATP1A4Q13733 1029 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 RAPGEF1Q13905 1077 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 NBPF8Q3BBV2 869 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 SULT6B1Q6IMI4 303 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 JMJD6Q6NYC1 403 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 PEG10Q86TG7 708 aaKnown RBP5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 ZNF354CQ86Y25 554 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 OR1N1Q8NGS0 311 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 ALG8Q9BVK2 526 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 KATNAL1Q9BW62 490 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 ZCWPW1Q9H0M4 648 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 HELLSQ9NRZ9 838 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 RIMKLBQ9ULI2 386 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 CA14Q9ULX7 337 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 ST3GAL5Q9UNP4 418 aa5.45□□□□□ -1.54
SMCHD1-205ENST00000581383 J3KTA2 159 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 PCDH17O14917 1159 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 DNPH1O43598 174 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms